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Protein Overview: gi|238727474, gi...

General Information:
Name(s) found: gi|77977935 [NCBI NR]
gi|238793101 [NCBI NR]
gi|238727474 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|77977935|ref|ZP_00833372.1| COG0224: F0F1-type ATP synthase, gamma subunit [Yersinia intermedia ATCC 29909] [NCBI NR]
  • gi|238793101|ref|ZP_04636729.1| ATP synthase gamma chain [Yersinia intermedia ATCC 29909] [NCBI NR]
  • gi|238727474|gb|EEQ19000.1| ATP synthase gamma chain [Yersinia intermedia ATCC 29909] [NCBI NR]
    • Organism: Yersinia intermedia ATCC 29909
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAKEIRSK IASVQNTQKI TKAMEMVAAS KMRKSQERMA ASRPYAETMR SVIGHLALGN  60
   61 LEYKHPYLEE RDVKRVGYLV VSTDRGLCGG LNINLFKRLL AEMKGWSEKG VECDLALIGS 120
  121 KAASFFGSVG GKIVAQVTGM GDNPSLSELI GPVKVMLQAY DEGRLDKLYI VNNKFINTMS 180
  181 QEPRIMQLLP LPPAEDGELK KKSWDYLYEP DPKALLDTLL RRYVESQVYQ GVVENLASEQ 240
  241 AARMVAMKAA TDNGGSLIKE LQLVYNKARQ ASITQELTEI VGGASAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 83.221849 ATP synthase (F1-ATPase), gamma subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  15.1137831131288 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  13.4145652211868 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  11.6641947022993 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  10.5487930833633 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  6.80604482262055 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  6.69705984340533 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  6.26502594800359 bayes_pls_golite062009
  • proton-transporting ATPase activity, rotational mechanism
    		•  5.63110240369142 bayes_pls_golite062009
  • transporter activity
    		•  4.45226670606147 bayes_pls_golite062009
  • hydrogen-exporting ATPase activity, phosphorylative mechanism
    		•  4.41868118040901 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  4.39356148903647 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.37099130240158 bayes_pls_golite062009
  • cation-transporting ATPase activity
    		•  3.59230188331019 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  1.90203817584499 bayes_pls_golite062009
  • binding
    		•  1.15817227356277 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.06444952929525 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.999037106125156 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.982260922227037 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.979897673854905 bayes_pls_golite062009
  • ATPase activity
    		•  0.97716527277771 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.832120661263195 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.826276552217418 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.799415003044834 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.796014711689645 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.795885962810984 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.786890420776467 bayes_pls_golite062009
  • protein binding
    		•  0.556386379655548 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
    		•  0.549067982072581 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  0.330850590075407 bayes_pls_golite062009
  • hydrolase activity
    		•  0.136524426848017 bayes_pls_golite062009
  • catalytic activity
    		•  0.0130900138976991 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle