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Protein Overview: gi|57165728, gi|...

General Information:
Name(s) found: gi|57236924 [NCBI NR]
gi|57165728 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|57236924|ref|YP_178039.1| competence protein ComEA [Campylobacter jejuni RM1221] [NCBI NR]
  • gi|57165728|gb|AAW34507.1| competence protein ComEA [Campylobacter jejuni RM1221] [NCBI NR]
    • Organism: Campylobacter jejuni RM1221
    Length: 79 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: establishment of competence for transformation [ISSLink to PubMed article]
    Molecular Function: competence pheromone activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLFLFFA LTAFLFGAVN INTATLKELK SLNGIGEAKA KAILEYRKEA NFTSIDDLKK  60
   61 VKGIGDKLFE KIKNDITIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] PSI-BLAST 27.522879 No description for 2oceA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • endodeoxyribonuclease activity
    		•  1.5110847985227 bayes_pls_golite062009
  • catalytic activity
    		•  1.38775153274716 bayes_pls_golite062009
  • hydrolase activity
    		•  1.34491282133304 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  1.30372533092482 bayes_pls_golite062009
  • endonuclease activity
    		•  0.806208535404629 bayes_pls_golite062009
  • DNA helicase activity
    		•  0.74632433173141 bayes_pls_golite062009
  • nuclease activity
    		•  0.60752003666333 bayes_pls_golite062009
  • excinuclease ABC activity
    		•  0.58627414236213 bayes_pls_golite062009
  • binding
    		•  0.31593057779343 bayes_pls_golite062009
  • helicase activity
    		•  0.14360375802992 bayes_pls_golite062009
  • damaged DNA binding
    		•  0.0195417646958704 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle