YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|75197644

General Information:
Name(s) found: gi|75197644 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|75197644|ref|ZP_00707714.1| COG1869: ABC-type ribose transport system, auxiliary component [Escherichia coli HS] [NCBI NR]
    • Organism: Escherichia coli HS
    Length: 143 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKMKKGTV LNSDISSVIS RLGHTDTLVV CDAGLPIPKS TTRIDMALTQ GVPSFMQVLG  60
   61 VVTNEMQVEA AIIAEEIKQH NPQLHETLLT HLEQLQKHQG NTIEIRYTTH EQFKQQTAES 120
  121 QAVIRSGECS PYANIILCAG VTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] PSI-BLAST 41.522879 The Structure of Bacillus subtilis RbsD complexed with D-ribose

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pentose transmembrane transporter activity
    		•  6.2485042058013 bayes_pls_golite062009
  • D-ribose transmembrane transporter activity
    		•  6.2485042058013 bayes_pls_golite062009
  • D-ribose-importing ATPase activity
    		•  6.2485042058013 bayes_pls_golite062009
  • monosaccharide-transporting ATPase activity
    		•  6.16163580465116 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  3.61697726040789 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  3.59380400317869 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  3.23077986789563 bayes_pls_golite062009
  • carbohydrate-transporting ATPase activity
    		•  2.96143396897618 bayes_pls_golite062009
  • carbohydrate-importing ATPase activity
    		•  2.94131146279507 bayes_pls_golite062009
  • catalytic activity
    		•  1.27293510281823 bayes_pls_golite062009
  • transporter activity
    		•  1.01746735264675 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.87756239772218 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.72784177997322 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.66323199697211 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.65947047335315 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.65175782581698 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.65175782581698 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.65128875691509 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.58773761631758 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.45644371872865 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  0.39893464292583 bayes_pls_golite062009
  • hydrolase activity
    		•  0.39195211650109 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.30534945021792 bayes_pls_golite062009
  • ATPase activity
    		•  0.29975321704305 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.27836523364225 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.27156652952534 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.27078585439886 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle