Protein Overview: gi|62642438, gi|...

General Information:
Name(s) found:	gi\|62642438 [NCBI NR] gi\|157822291 [NCBI NR] gi\|149040330 [NCBI NR] gi\|109464066 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|62642438\|ref\|XP_219965.3\| PREDICTED: similar to Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100) [Rattus norvegicus] [NCBI NR] gi\|157822291\|ref\|NP_001099835.1\| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Rattus norvegicus] [NCBI NR] gi\|149040330\|gb\|EDL94368.1\| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor (predicted) [Rattus norvegicus] [NCBI NR] gi\|109464066\|ref\|XP_001069140.1\| PREDICTED: similar to Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100) [Rattus norvegicus] [NCBI NR] Tax_Id=10116 PREDICTED: similar to Transcription initiation factor TFIID subunit 5 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 PREDICTED: similar to Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100) [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta] Tax_Id=10116 Similar to RIKEN cDNA 6330528C20 gene [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta] TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor (predicted) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 SIMILAR TO RIKEN CDNA 6330528C20 GENE [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] PREDICTED: similar to Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100) [Rattus norvegicus] [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Taf5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [rat-ipi-250309-contam.fasta] TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Predicted) OS=Rattus norvegicus GN=Taf5 [011711_HMR.fasta] TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Predicted) OS=Rattus norvegicus GN=Taf5 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta] Protein Taf5 OS=Rattus norvegicus GN=Taf5 PE=4 SV=1 [Aridor_1205.fasta] Protein Taf5 OS=Rattus norvegicus GN=Taf5 PE=1 SV=1 [RAT.fasta.20160308]
Organism:	Rattus norvegicus
Length:	798 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA] transcription factor TFIID complex [UNKNOWN] transcription factor TFTC complex [UNKNOWN] cytoplasm [UNKNOWN] intracellular membrane-bounded organelle [UNKNOWN] actin cytoskeleton [UNKNOWN] [NOT]nucleolus [UNKNOWN] cellular_component [ND] nucleoplasm [UNKNOWN]
Biological Process:	biological_process [ND] regulation of transcription [IEA] transcription initiation from RNA polymerase II promoter [UNKNOWN] RNA elongation from RNA polymerase II promoter [UNKNOWN]
Molecular Function:	transcription initiation factor activity [UNKNOWN] DNA binding [UNKNOWN] histone acetyltransferase activity [UNKNOWN] transcription factor activity [UNKNOWN] protein binding [UNKNOWN] transcription regulator activity [IEA] protein dimerization activity [UNKNOWN] promoter binding [UNKNOWN] molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALAEEQTE VAVKLESEGP PTLLPPQAGD GAGEGSGGTP NNGPNGGGGN VAAAAGGDGG  60
   61 TPKPVVAVSA AAPAGAAPVP AAPAEAGAPH DRQTLLAVLQ FLRQSNLREA EEALRREARL 120
  121 LEEAVAGSGA PGELDGAGAE AASALLSRVT ASVPGSAAPD TPGAGASVTS VFSGSASGPA 180
  181 APGKVASVAV EDQPDVSAVL SAYNQQGDPT MYEEYYSGLK HFIECSLDCH RAELSQLFYP 240
  241 LFVHMYLELV YNQHESEAKS FFEKFHGDQE CYYQDDLRVL SSLTKKEHMK GNETMLDFRT 300
  301 SKFVLRISRD SYQLLKRHLQ EKQNNQIWNI VQEHLYIDIF DGMPRSKQQI DAMVGSLAGE 360
  361 AKREANKSKV FFGLLKEPEI EVPLDDEDEE GENEEGKPKK KKPKKDSIGS KSKKQDPNAP 420
  421 PQNRIPLPEL KDSDKLDKIM NMKETTKRVR LGPDCLPSIC FYTFLNAYQG LTAVDVTDDS 480
  481 SLIAGGFADS TVRVWSVTPK KLRSVKQASD LSLIDKESDD VLERIMDEKT ASELKILYGH 540
  541 SGPVYGASFS PDRNYLLSSS EDGTVRLWSL QTFTCLVGYK GHNYPVWDTQ FSPYGYYFVS 600
  601 GGHDRVARLW ATDHYQPLRI FAGHLADVNC TRFHPNSNYV ATGSADRTVR LWDVLNGNCV 660
  661 RIFTGHKGPI HSLTFSPNGR FLATGATDGR VLLWDIGHGL MVGELKGHTD TVCSLRFSRD 720
  721 GEILASGSMD NTVRLWDAIK AFEDLETDDF TTATGHINLP ENSQELLLGT YMTKSTPVVH 780
  781 LHFTRRNLVL AAGAYSPQ

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: gi|62642438, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: