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Protein Overview: CE39479

General Information:
Name(s) found: CE39479 [WormBase]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • WBGene00007755 Ectonucleotide pyrophosphatase\/phosphodiesterase C27A7.3 status:Partially_confirmed UniProt:P90755 protein_id:CAB02785.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 743 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: nucleotide metabolic process [IEALink to PubMed article]
    Molecular Function: hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRVVDVNS KKTGTSWKKK LMKIVIWSLA MLSFIAGLVL LGLVAAATIS GSKNLPTAEY  60
   61 KWAGCENLGK CQIDGFSTPP LVILSFDGFA KEYLERRIVK SLELIAECGV KADRVYPSFP 120
  121 SKTFPNHYTM VTGLYPESHG ITDNYVFDPN LYPELLAMRK HEAKEFYQAE PIWSAYKRLT 180
  181 GNRVHCLFWV GCYYNITGYM PDVSPDYNQE LPLKERIDTL IGWLKLPETE RPALITAYLH 240
  241 EPDQAGHMQK NVNQELEEVN NYIDILMKAL HDENLLECVN LVIVSDHGMQ ALNNSIEVET 300
  301 IVNMDGLVLS KGVVARIHLN ETDRSIDEVA GEIRCKIDGV KVNTINDIPL RKHYSKSKRV 360
  361 GDIIIEGKPG TSFYKSETNL GDHGYDYHNE NMHTVMFARG PSFLQNVTVP SFQNVQYMNL 420
  421 WLYLLGLEGT VDNNGTIGFF DSILKNPPIR ENKWDSMEEC LNFGSAEVLQ CDKAEGHDLK 480
  481 KLSLHLENCK EHQNLPIYSK NNCFQSYCEN SLIIHKNRQD VRKGVIESLT FSFSRNQSVF 540
  541 ENSFSFVNTK YSIECPKLDT KDNFFTAGSE AISKLANAQY KFPSSFMKSE LISSLLSLKD 600
  601 ETIKFVDIWV PLSIKTDEYL KHYGKLFVLS GLAVDRNLDG IADDEESKEP THFYRILITC 660
  661 TGNWLSTNPP LCKKYSDTKA LAFVFPILNK KTTMDCMDSD AILLDYTSTI EDVENIASFQ 720
  721 FQIGALSHQQ NVYLRRNITT SLW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..471] PSI-BLAST 48.30103 No description for 2gsnA was found.
    2 View Details [472..743] PSI-BLAST 41.221849 No description for 2o3bA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • deoxyribonuclease activity
    		•  2.92550377520129 bayes_pls_golite062009
  • endodeoxyribonuclease activity
    		•  2.12968677822082 bayes_pls_golite062009
  • nuclease activity
    		•  1.67614365360206 bayes_pls_golite062009
  • binding
    		•  1.46663316292334 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.35290345812147 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.32069971596699 bayes_pls_golite062009
  • hydrolase activity
    		•  1.29111119519642 bayes_pls_golite062009
  • DNA binding
    		•  1.27448613694343 bayes_pls_golite062009
  • catalytic activity
    		•  1.0342182748198 bayes_pls_golite062009
  • endonuclease activity
    		•  0.801381411877942 bayes_pls_golite062009
  • protein binding
    		•  0.556107803418262 bayes_pls_golite062009
  • endodeoxyribonuclease activity, producing 5'-phosphomonoesters
    		•  0.397835873895756 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle