YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE39479
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRVVDVNS KKTGTSWKKK LMKIVIWSLA MLSFIAGLVL LGLVAAATIS GSKNLPTAEY  60
   61 KWAGCENLGK CQIDGFSTPP LVILSFDGFA KEYLERRIVK SLELIAECGV KADRVYPSFP 120
  121 SKTFPNHYTM VTGLYPESHG ITDNYVFDPN LYPELLAMRK HEAKEFYQAE PIWSAYKRLT 180
  181 GNRVHCLFWV GCYYNITGYM PDVSPDYNQE LPLKERIDTL IGWLKLPETE RPALITAYLH 240
  241 EPDQAGHMQK NVNQELEEVN NYIDILMKAL HDENLLECVN LVIVSDHGMQ ALNNSIEVET 300
  301 IVNMDGLVLS KGVVARIHLN ETDRSIDEVA GEIRCKIDGV KVNTINDIPL RKHYSKSKRV 360
  361 GDIIIEGKPG TSFYKSETNL GDHGYDYHNE NMHTVMFARG PSFLQNVTVP SFQNVQYMNL 420
  421 WLYLLGLEGT VDNNGTIGFF DSILKNPPIR ENKWDSMEEC LNFGSAEVLQ CDKAEGHDLK 480
  481 KLSLHLENCK EHQNLPIYSK NNCFQSYCEN SLIIHKNRQD VRKGVIESLT FSFSRNQSVF 540
  541 ENSFSFVNTK YSIECPKLDT KDNFFTAGSE AISKLANAQY KFPSSFMKSE LISSLLSLKD 600
  601 ETIKFVDIWV PLSIKTDEYL KHYGKLFVLS GLAVDRNLDG IADDEESKEP THFYRILITC 660
  661 TGNWLSTNPP LCKKYSDTKA LAFVFPILNK KTTMDCMDSD AILLDYTSTI EDVENIASFQ 720
  721 FQIGALSHQQ NVYLRRNITT SLW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle