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Protein Overview: pde-4

General Information:
Name(s) found: pde-4 / CE39396 [WormBase]
Description(s) found:
Found 12 descriptions.
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  • WBGene00020114 locus:pde-4 status:Confirmed UniProt:Q2V4U0 protein_id:CCD69646.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 673 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal transduction [IEALink to PubMed article]
    Molecular Function: catalytic activity [IEALink to PubMed article]
    3',5'-cyclic-nucleotide phosphodiesterase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLLCLYFN IHPISVIIFL LTVQAHAVFI SLPTDQPDVH LVVLLLAVLM PIFSIKRNED  60
   61 GMNGVARRKQ FKLRPWQSTA LPSRHDHYSC AGSATAADGL GGAHLTPSLS SSVHARRESF 120
  121 LYRASDDLRE ASSLRPVSRA SSIASNEHGH GDDLIVTPFA QLLASLRNVR SNLISITNIQ 180
  181 NSDDSRHANR SAKRPPLHNI ELPDDVVHCA HDTLEELDWC LDQLETIQTH RSVSEMASSK 240
  241 FRKMLNKELS HFAESSKSGT QVSKFLITTY MDKEEDEPSI EIEVPTEVQG PSTSGPMTLS 300
  301 ILKKAQTAAM NKISGVRKLR APSHDGHVPE YGVNCAREIA VHMQRLDDWG PDVFKIDELS 360
  361 KNHSLTVVTF SLLRQRNLFK TFEIHQSTLV TYLLNLEHHY RNNHYHNFIH AADVAQSMHV 420
  421 LLMSPVLTEV FTDLEVLAAI FAGAVHDVDH PGFTNQYLIN SNNELAIMYN DESVLEQHHL 480
  481 AVAFKLLQDS NCDFLANLSR KQRLQFRKIV IDMVLATDMS KHMSLLADLK TMVEAKKVAG 540
  541 NNVIVLDKYN DKIQVLQSMI HLADLSNPTK PIELYQQWNQ RIMEEYWRQG DKEKELGLEI 600
  601 SPMCDRGNVT IEKSQVGFID YIVHPLYETW ADLVYPDAQN ILDQLEENRE WYQSRIPEEP 660
  661 DTARTVTEDD EHK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] MSA 5.057975 View MSA. No confident structure predictions are available.
    2 View Details [189..286] MSA 2.128991 View MSA. No confident structure predictions are available.
    3 View Details [287..673] PSI-BLAST 125.0 Catalytic domain of cyclic nucleotide phosphodiesterase pde4d

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • cyclic-nucleotide phosphodiesterase activity
    		•  2.9145758096876 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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