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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pde-4
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLLCLYFN IHPISVIIFL LTVQAHAVFI SLPTDQPDVH LVVLLLAVLM PIFSIKRNED  60
   61 GMNGVARRKQ FKLRPWQSTA LPSRHDHYSC AGSATAADGL GGAHLTPSLS SSVHARRESF 120
  121 LYRASDDLRE ASSLRPVSRA SSIASNEHGH GDDLIVTPFA QLLASLRNVR SNLISITNIQ 180
  181 NSDDSRHANR SAKRPPLHNI ELPDDVVHCA HDTLEELDWC LDQLETIQTH RSVSEMASSK 240
  241 FRKMLNKELS HFAESSKSGT QVSKFLITTY MDKEEDEPSI EIEVPTEVQG PSTSGPMTLS 300
  301 ILKKAQTAAM NKISGVRKLR APSHDGHVPE YGVNCAREIA VHMQRLDDWG PDVFKIDELS 360
  361 KNHSLTVVTF SLLRQRNLFK TFEIHQSTLV TYLLNLEHHY RNNHYHNFIH AADVAQSMHV 420
  421 LLMSPVLTEV FTDLEVLAAI FAGAVHDVDH PGFTNQYLIN SNNELAIMYN DESVLEQHHL 480
  481 AVAFKLLQDS NCDFLANLSR KQRLQFRKIV IDMVLATDMS KHMSLLADLK TMVEAKKVAG 540
  541 NNVIVLDKYN DKIQVLQSMI HLADLSNPTK PIELYQQWNQ RIMEEYWRQG DKEKELGLEI 600
  601 SPMCDRGNVT IEKSQVGFID YIVHPLYETW ADLVYPDAQN ILDQLEENRE WYQSRIPEEP 660
  661 DTARTVTEDD EHK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle