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Protein Overview: sru-12

General Information:
Name(s) found: sru-12 / CE38240 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00005675 locus:sru-12 status:Partially_confirmed UniProt:O62470 protein_id:CAA16356.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    molting cycle, collagen and cuticulin-based cuticle [IMP]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTMNNVSIQ GDQRYIDYKF DFLTFPVLVA CIPLTYLVPT VFIILKVFKC YFRNLVGKQE  60
   61 ATMNPHVFFV IVTAQLTSIF FMLSDYITIR LPFTGILTSW CASQQPNHLL KVLFFYTFYF 120
  121 TYVSWQFPFL LSILRLIPLY YPQKHNEVCA KTIKFAIPFI YLYPFIFGFS LIPAVGTCRQ 180
  181 LLGPYQFGAI FIWYTGNWFD IKLMNGSIFN LILWLLLCII SNLALYFKLK KLKNHRKSVI 240
  241 LQRAELSLSL TALSMLLSFV TTLICALIFI IFPTMAVYFI ALRPFGNDCE ICFGPWIFYL 300
  301 THPAFKKKKI LFWKDASKIG TIHTTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 28.69897 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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