| Protein: | sru-12 |
| Organism: | Caenorhabditis elegans |
| Length: | 326 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sru-12.
| Description | E-value | Query Range |
Subject Range |
|
|
244.0 | [0..3] | [316..9] |
|
Region A: Residues: [1-326] |
1 11 21 31 41 51
| | | | | |
1 MDTMNNVSIQ GDQRYIDYKF DFLTFPVLVA CIPLTYLVPT VFIILKVFKC YFRNLVGKQE 60
61 ATMNPHVFFV IVTAQLTSIF FMLSDYITIR LPFTGILTSW CASQQPNHLL KVLFFYTFYF 120
121 TYVSWQFPFL LSILRLIPLY YPQKHNEVCA KTIKFAIPFI YLYPFIFGFS LIPAVGTCRQ 180
181 LLGPYQFGAI FIWYTGNWFD IKLMNGSIFN LILWLLLCII SNLALYFKLK KLKNHRKSVI 240
241 LQRAELSLSL TALSMLLSFV TTLICALIFI IFPTMAVYFI ALRPFGNDCE ICFGPWIFYL 300
301 THPAFKKKKI LFWKDASKIG TIHTTF
|
| Detection Method: |  |
| Confidence: | 28.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
