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Protein Overview: cat-1

General Information:
Name(s) found: cat-1 / CE38560 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00000295 locus:cat-1 status:Partially_confirmed UniProt:Q7Z1Q0 protein_id:CCD68670.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 490 amino acids

    Gene Ontology:
    Cellular Component: synaptic vesicle [IDALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: dopamine biosynthetic process [IMPLink to PubMed article]
    drug transport [IEALink to PubMed article]
    phosphate transport [IEALink to PubMed article]
    feeding behavior [IMPLink to PubMed article]
    monoamine transport [IDALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: phosphate transmembrane transporter activity [IEALink to PubMed article]
    monoamine transmembrane transporter activity [ISSLink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYILDWIST YRNNRKILLL IVYIDWDENP IGPVGRSERR KESDRKNHNS KNREYNDRRK  60
   61 YMSPAAKKPP VETEEPAVRT ISEEERHKLL ASENVHVGLM FGSKALVQLL VNPWIGPLTN 120
  121 RIGYTMPMFG GFVIMFCSTI LFAFGDSYFT LWLARALQGV GSACTSTSGM GMLAQAYPDD 180
  181 LERGSAMGIA LGGLALGVLV GPPYGGLLYQ WSGKELPFVL LALLALFDGS IQFMVLQPKI 240
  241 DRGEPEGSSI KQLAKDPYII VAAGAITIGN LGIAMLEPSL PLWMMESWGA NSLERGAAFL 300
  301 PASISYLIGT NIFGPLAHRI GRWLSSFIGL VVIGFSLLSI PSATSVAGLI IPHALLGFSI 360
  361 GMIDASMFPL MGYLVDIRHV GVYGSIYAIA DAAFCFAFAL GPFFSGPLVK SLGFPTMMYI 420
  421 IAVISFLYAP LMFLLKNPPV LIEPTPQTQS VELRQNGDSR VTNENYERIE GMNIAGQLQQ 480
  481 NNMYSATSAF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..490] PSI-BLAST 27.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.24937104052238 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • binding
    		•  0.818732184064642 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle