| Protein: | cat-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 490 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cat-1.
| Description | E-value | Query Range |
Subject Range |
|
|
211.0 | [0..4] | [444..663] |
|
Region A: Residues: [1-490] |
1 11 21 31 41 51
| | | | | |
1 MSYILDWIST YRNNRKILLL IVYIDWDENP IGPVGRSERR KESDRKNHNS KNREYNDRRK 60
61 YMSPAAKKPP VETEEPAVRT ISEEERHKLL ASENVHVGLM FGSKALVQLL VNPWIGPLTN 120
121 RIGYTMPMFG GFVIMFCSTI LFAFGDSYFT LWLARALQGV GSACTSTSGM GMLAQAYPDD 180
181 LERGSAMGIA LGGLALGVLV GPPYGGLLYQ WSGKELPFVL LALLALFDGS IQFMVLQPKI 240
241 DRGEPEGSSI KQLAKDPYII VAAGAITIGN LGIAMLEPSL PLWMMESWGA NSLERGAAFL 300
301 PASISYLIGT NIFGPLAHRI GRWLSSFIGL VVIGFSLLSI PSATSVAGLI IPHALLGFSI 360
361 GMIDASMFPL MGYLVDIRHV GVYGSIYAIA DAAFCFAFAL GPFFSGPLVK SLGFPTMMYI 420
421 IAVISFLYAP LMFLLKNPPV LIEPTPQTQS VELRQNGDSR VTNENYERIE GMNIAGQLQQ 480
481 NNMYSATSAF
|
| Detection Method: |  |
| Confidence: | 27.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.24937104052238 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| binding | 0.818732184064642 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
