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Protein Overview: CE38808

General Information:
Name(s) found: CE38808 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00044455 status:Partially_confirmed UniProt:Q4PIX1 protein_id:CCD69932.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 528 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    drug transport [IEALink to PubMed article]
    carbohydrate transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: ion transmembrane transporter activity [IEALink to PubMed article]
    sugar:hydrogen symporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLNTNRFH WLCFFLWQFA LFFCCQQIFS IFYNFSPGLS CDDPSFQFSK PKCKLSKSEI  60
   61 CSELTANCSK IVIEEAPFHS MVQDFKMFCG TKAYDAAWVA TIQFIGVLIG AITYGHLGDH 120
  121 FGRKPVSFFG ISVGILFGVA SGFAPSWEVF AAFRFIVGTS IASILIVFYA YILEFIEPEQ 180
  181 RVFLRSFFNW GYARLVFTLA CFICGYWRSA AIATSLLSLP ILPVLLILPE SPKWFNTKKR 240
  241 FRDARAAEKR VAWLSGIPYV NDEDQSIEIS EKLEEKSTKI YTMKDLFTSW TIAYRTIVVG 300
  301 SLWFSTSLSA FGSDLNSGNL AGNFYLSQFV SGAVTAFAKI FVFLLDTYVP SFDRRRLHQY 360
  361 PQIAMILCYC VIMVLMILPE SDCGSQGSRD LAIIIINIIG VSFIEITWDA CYLVAVECFP 420
  421 TKIRTIGIGT CSLLARTGAL LAPQMAYLSD IYRPAPYAVV CSIGTISLLI SCVFLPDTKG 480
  481 VDLAALDPTE ELDYDRKKSM TENIVIQRKR TGTLAAARLS IVENNINA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..528] PSI-BLAST 30.0 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • organic anion transmembrane transporter activity
    		•  3.3413526350788 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.52916479889426 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.24937104052238 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • binding
    		•  0.818732184064642 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  0.312628600969375 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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