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Protein Overview: trr-1

General Information:
Name(s) found: trr-1 / CE38054 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00007028 locus:trr-1 status:Confirmed UniProt:Q5CZ43 protein_id:CAI59119.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 4053 amino acids

    Gene Ontology:
    Cellular Component: condensed chromosome [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    proteinaceous extracellular matrix [IEALink to PubMed article]
    histone acetyltransferase complex [ISSLink to PubMed article]
    Biological Process: negative regulation of vulval development [IGILink to PubMed article][IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed articleLink to PubMed article]
    locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    cell adhesion [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    blood coagulation [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: calcium ion binding [IEALink to PubMed article]
    phosphotransferase activity, alcohol group as acceptor [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPAMASPGY RSVQSDRSNH LTELETRIQN LADNSQRDDV KLKMLQEIWS TIENHFTLSS  60
   61 HEKVVERLIL SFLQVFCNTS PQFIAENNTQ QLRKLMLEII LRLSNVEAMK HHSKEIIKQM 120
  121 MRLITVENEE NANLAIKIVT DQGRSTGKMQ YCGEVSQIMV SFKTMVIDLT ASGRAGDMFN 180
  181 IKEHKAPPST SSDEQVITEY LKTCYYQQTV LLNGTEGKPP LKYNMIPSAH QSTKVLLEVP 240
  241 YLVIFFYQHF KTAIQTEALD FMRLGLDFLN VRVPDEDKLK TNQIITDDFV SAQSRFLSFV 300
  301 NIMAKIPAFM DLIMQNGPLL VSGTMQMLER CPADLISVRR EVLMALKYFT SGEMKSKFFP 360
  361 MLPRLIAEEV VLGTGFTAIE HLRVFMYQML ADLLHHMRNS IDYEMITHVI FVFCRTLHDP 420
  421 NNSSQVQIMS ARLLNSLAES LCKMDSHDTF QTRDLLIEIL ESHVAKLKTL AVYHMPILFQ 480
  481 QYGTEIDYEY KSYERDAEKP GMNIPKDTIR GVPKRRIRRL SIDSVEELEF LASEPSTSED 540
  541 ADESGGDPNK LPPPTKEGKK TSPEAILTAM STMTPPPLAI VEARNLVKYI MHTCKFVTGQ 600
  601 LRIARPSQDM YHCSKERDLF ERLLRYGVMC MDVFVLPTTR NQPQMHSSMR TKDEKDALES 660
  661 LANVFTTIDH AIFREIFEKY MDFLIERIYN RNYPLQLMVN TFLVRNEVPF FASTMLSFLM 720
  721 SRMKLLEVSN DKTMLYVKLF KIIFSAIGAN GSGLHGDKML TSYLPEILKQ STVLALTARE 780
  781 PLNYFLLLRA LFRSIGGGAQ DILYGKFLQL LPNLLQFLNK LTSCQHRIQM RELFVELCLT 840
  841 VPVRLSSLLP YLPLLMDPLV CAMNGSPNIV TQGLRTLELC VDNLQPEYLL ENMLPVRGAL 900
  901 MQGLWRVVSK APDTSSMTAA FRILGKFGGA NRKLLNQPQI LQVATLGDSY INMEFSRMGL 960
  961 DGNHSIHLPL SELMRVVADQ MRYPADMILN PSPAMIPSTH MKKWCMELSK AVLLAGLGSS1020
 1021 GSPITPSANL PKIIKKLLED FDPNNRTTEV YTCPRESDRE LFVNALLAMA YGIWNKDGFR1080
 1081 HVYSKFFIKV LRQFALIGVL EYIGGNGWMR HAEEEGVLPL CLDSSVMVDA LIICLSETSS1140
 1141 SFIIAGVMSL RHINETLSLT LPDIDQMSKV PMCKYLMEKV FKLCHGPAWY ARSGGINAIG1200
 1201 YMIESFPRKF VMDFVIDVVD SIMEVILGTV EEISSGSADS AYDCLKKMMR VYFIKEEGQE1260
 1261 EENLTLATIF VSAISKHYFH SNERVREFAI GLMDHCMVHS RLAPSLDKFY YRFKEFFEPE1320
 1321 LMRVLTTVPT MSLADAGGSL DGVQNYMFNC PDGFDFEKDM DMYKRYLSHL LDIAQTDTFT1380
 1381 LNQRNAFKKC ETCPSHFLPP FPITTHIDSM RASALQCLVI AYDRMKKQYI DKGIELGDEH1440
 1441 KMIEILALRS SKITVDQVYE SDESWRRLMT VLLRAVTDRE TPEIAEKLHP SLLKVSPIST1500
 1501 IIIATFGASY IRNISGAGDD SDSDRHISYN DIMKFKCLVE LNPKILVTKM AVNLANQMVK1560
 1561 YKMSDKISRI LSVPSSFTEE ELDDFEAEKM KGIRELDMIG HTVKMLAGCP VTTFTEQIIV1620
 1621 DISRFAAHFE YAYSQDVLVN WIDDVTVILN KSPKDVWKFF LSRESILDPA RRSFIRRIIV1680
 1681 YQSSGPLRQE FMDTPEYFEK LIDLDDEENK DEDERKIWDR DMFAFSIVDR ISKSCPEWLI1740
 1741 SPNSPIPRIK KLFSETEFNE RYVVRALTEV KKFQEEIIVK RMTEHKYKVP KLILNTFLRY1800
 1801 LRLNIYDYDL FIVIASCFNG NFVTDLSFLR EYLETEVIPK VPLQWRRELF LRIMQKFDTD1860
 1861 PQTAGTSMQH VKALQYLVIP TLHWAFERYD TDEIVGTAPI DDSDSSMDVD PAGSSDNLVA1920
 1921 RLTSVIDSHR NYLSDGMVIV FYQLCTLFVQ NASEHIHNNN CKKQGGRLRI LMLFAWPCLT1980
 1981 MYNHQDPTMR YTGFFFLANI IERFTINRKI VLQVFHQLMT TYQQDTRDQI RKAIDILTPA2040
 2041 LRTRMEDGHL QILSHVKKIL IEECHNLQHV QHVFQMVVRN YRVYYHVRLE LLTPLLNGVQ2100
 2101 RALVMPNSVL EKFSWQTRRH AVEICEMVIK WELFRTLKTD HIISDEEALE VDKQLDKLRT2160
 2161 ASSTDRFDFE EAHNKRDMPD AQRTIIKEHA DVIVNMLVRF CMTFHQNSGS SSTSQSGNHG2220
 2221 VELTKKCQLL LRAALRPSMW GEFVSFRLTM IEKFLSIPND NALRNDISST AYANTIQNAQ2280
 2281 HTLDMLCNII PVMPKTSLMT MMRQLQRPLI QCLNNGAQMT RLVTQIVSRL LEKTNVSVNG2340
 2341 LDELEQLNQY ISRFLHEHFG SLLKNLSGPV LGVLGAFSLL RTICGHEPAY LDHLMPSFVK2400
 2401 VMERAAKEHL AYVANSQDGN MVKNFFPDVA ELLCACMELV RPRVDHISME IKRSIVGGII2460
 2461 AELIIKSNHD KIIQTSVKLL GAMISTQDME FTILTVLPLL VRIQSIIVTK FKNCKDLIAD2520
 2521 YLVVVITVFE NSEYRNSEAG SRLWEGFFWG LKSSDPQTRE KFSIVWEKTW PHMATVDIAH2580
 2581 RMKYIMQNQD WSKFKHAFWL KFALWGMLRT IAKRPTDPNN KRKKVILLNC ATPWRTIEYA2640
 2641 AKLKDQPMEV ETEMKREEPE PMEVDEKDSQ DDSKDAGEPK EKEKLTLELL LAGQQELLDE2700
 2701 ASNYDFADAL DTVSQITFAL NENQVTSKMW VVLFKSFWSS LSQSEIEDFT ALVVPFMSSG2760
 2761 VHNNYQTGVQ DSVLAVWLEA VGDAVHLPSR LIEFISSKHE CWHTGIRLLE NHIWTIPKQL2820
 2821 NNTLLREMKV APGLAGDIET LESLGTLYNE ISEFDQFAAI WERRAVFPDT MRAMSAMQLG2880
 2881 DMELAQSYLE KSMSSTYETL APTINPNNTS NSEKHVSPII DKEYDHWMEM YITNCSELLQ2940
 2941 WQNVADVCNG KDMQHVRGLI NAASHIPDWN VVEECKSQIA GCIPPSFHLD YTLFNLMSTV3000
 3001 MRMNENSSPT HMKERCKIAI QECTEAHISR WRALPSVVSY GHVKILQAMN LVREIEESTD3060
 3061 IRIALLEAPS NKVDQALMGD MKSLMKVFRN RTPTTSDDMG FVSTWYDWRN QIHGMMLQRF3120
 3121 EYWDKVGLNV AATGNQSIVP IHSMAQAQLA VAKHAKNLGF HNLTKDLLNK LAGLTAIPMM3180
 3181 DAQDKVCTYG KTLRDMANSA ADERVKNELL CEALEVLEDV RIDDLQKDQV AALLYHRANI3240
 3241 HSVLDQAENA DYTFSAASQL VDLQNSVTTT GIKLMKNWGH HLYKRFFSTT VCKETGNNFG3300
 3301 RQALACYFIA ARVDNDIKAR KPIAKILWLS KHLNACGSHE VMNRVIKKQL HSLNLFNWLY3360
 3361 WLPQLVTDVR YKPNSNFVLI LCKMAAAHPL QVFYHIREAV SVDDIDSVLE EDYTDEQMSM3420
 3421 DVSDEDCFAD DPPFDRILKI CLKYRPTDIR VFHRVLKELD EMNETWVERH LRHAICLKDQ3480
 3481 MFKDFSEQMD ATFNEMQYSE DVTMMTLRWR KQLEEDLVYF QQNYNLDFLE IRNKRKMIVT3540
 3541 KGCMGVEKSQ IMFEKELSQV FTEPAGMQDE FDFVTNMTNM MVSQLDIHAV DAPRPQGYIR3600
 3601 IVLDWIRAIR RRFDRLPRRI PLESSSPYLA RFSHRTGCIE MPYDLLNVLR AKNHTLMASN3660
 3661 QTGQYISMLS RFEPNFEIVI KGGQVIRKIY IRGQTGKSAA FYLKKSVQDE PTNRVPQMFK3720
 3721 HLDHVLQTDR ESARRHLHAP TVLQMRVGQK TTLYEVASVQ PYAMPPDCTR NYPASQIDIV3780
 3781 HPYDVLTATF NGSYYPDDMV LHFFERFAQS SSSIGQPLPT PTNQDGTVAP PRLTEAHHIK3840
 3841 NIIYEDFARD MIPFRLLYDY LTARYPDPVM YYAMKKQLLH SLAVLSTIEY HCNLTPMGPD3900
 3901 QMMMTMNTGV LSNPSYRFEI RGGRSLHDIQ HFGHEVPFRL TPNLSILVGV AQDGDLLWSM3960
 3961 AAASKCLMKK EPEVIMRPLV WDEFANNTDC DKSRLQVFAC HASNSYINGV ASKLRNTNSA4020
 4021 DAKLRKDDCV SLISRAKDSD NLARMPPTYH AWF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle