YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: tag-19

General Information:
Name(s) found: tag-19 / CE40800 [WormBase]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • WBGene00006409 locus:hdl-2 status:Partially_confirmed UniProt:Q17874 protein_id:CAA90974.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 611 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carboxylic acid metabolic process [IEALink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEALink to PubMed article]
    carboxy-lyase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAEVPALIV CLVVSLCFNA GFIVYFVLKR KSEKVSEYKK VENPDVENFS KSSVRPPPPE  60
   61 PKPQRSPPDR EKESKDPQPM NNNRSKEHVL RSENQAPTNE IQQRSDRQKL QEPIGKNEFI 120
  121 KCMSLVVQFI NDYFDESHKQ PVIPENDVNS SRIHVKVPEK AEELTEILKD LKEIVIPNIC 180
  181 HTHHPRYHAK FAGKSLADLV ASTISAALGH DVNSSPIIES IERIICKWLS TSMAIPQIKS 240
  241 SLGELRDPIG TVFYTPCDVF ISVIRHAIEK FEKTDSGKER SKNADYIVYC SDDSQVPLKE 300
  301 PCISCRVKLR KVITDEKNGS GMTSANLLKQ MEKDIARGFT PLVIIANYGS ANIAANDEIW 360
  361 DLVTVSRSKK IWLHLDASYA GCEWLDSNSR NNVHALISEV HSVHITCSSL FPYSGRISVV 420
  421 WSCEKLELDG AKILYGEHPI RLWILIRLHG IRSIREAVKR KIILGNAFSE RMSHHSQLFE 480
  481 MHHTNEHGVT VFQYKNKKIK DRTEDTNKIT SMFHNYLVLS STLKFSIVSF HGKVLIKSVV 540
  541 NYGRCNLSIM DESVSTLVNS VDEFEEALKK KKKIVCETPK NEFCEMIGGS PNETTDTTQS 600
  601 DDGIDKKKKK N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] deduced N/A No confident structure predictions are available.
    2 View Details [114..611] PSI-BLAST 87.0 DOPA decarboxylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • transferase activity
    		•  0.737426388870721 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  0.130698724135981 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.11598778799668 bayes_pls_golite062009
  • aromatic-L-amino-acid decarboxylase activity
    		•  0.10589462882093 bayes_pls_golite062009
  • binding
    		•  0.0138724523355769 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle