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Protein Overview: CE39394

General Information:
Name(s) found: CE39394 [WormBase]
Description(s) found:
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  • WBGene00019891 status:Partially_confirmed UniProt:Q21741 protein_id:CCD69275.1 [WormBase]
  • gi|82654509|gb|AAA83162.2| Hypothetical protein R05F9.7 [Caenorhabditis elegans] [NCBI NR]
  • gi|115533877|ref|NP_494885.2| hypothetical protein R05F9.7 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE39394 WBGene00019891 status:Predicted UniProt:Q21741_CAEEL protein_id:AAA83162.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • [wormORF-contam.fasta]
  • CE39394 WBGene00019891 status:Predicted UniProt:Q21741_CAEEL protein_id:AAA83162.2| [wormORF-contam.fasta]
  • CE39394 WBGene00019891 status:Predicted TR:Q21741 protein_id:AAA83162.2 [wormpep160-contam.fasta]
  • Hypothetical protein R05F9.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • R05F9.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE39394 WBGene00019891 status:Partially_confirmed UniProt:Q21741 protein_id:AAA83162.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE39394 WBGene00019891 status:Partially_confirmed UniProt:Q21741 protein_id:CCD69275.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_R05F9.7 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 357 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIIQEFLAK ILSLLAEPIP LVEGQWLNIT FDVPILVDIN APLTPTLQFI YASESILICV  60
   61 GMFLMVYFNY FVKSFQIVHL NLQYLFLLFT TLYIFGSLAR FYMILVQLKF VTDLDTPYLL 120
  121 VAGILRMEHY GVSLSAILVV TIERAFATYY VVDYETKHRC WVAAFCALVS LTYTQCFVIP 180
  181 ICFFEASLLY IILFASLWAV FSNIVLMCLY YYNVQESKRL SWKAENLRKM KNVNYTLSKK 240
  241 FQVEENVKII KYLQVMSSML VFLIFFVIIF IVVPRVYLGS KTYSGQVMIS LFDINLALGA 300
  301 ILIPSVCVLH LRKTRDMPFS GKIHCLNKRR DDRQVNPITV FEDVTKSYFD QFQTSWR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..357] PSI-BLAST 41.045757 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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