| Protein: | CE39394 |
| Organism: | Caenorhabditis elegans |
| Length: | 357 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39394.
| Description | E-value | Query Range |
Subject Range |
|
|
204.0 | [0..7] | [330..124] |
|
Region A: Residues: [1-357] |
1 11 21 31 41 51
| | | | | |
1 MHIIQEFLAK ILSLLAEPIP LVEGQWLNIT FDVPILVDIN APLTPTLQFI YASESILICV 60
61 GMFLMVYFNY FVKSFQIVHL NLQYLFLLFT TLYIFGSLAR FYMILVQLKF VTDLDTPYLL 120
121 VAGILRMEHY GVSLSAILVV TIERAFATYY VVDYETKHRC WVAAFCALVS LTYTQCFVIP 180
181 ICFFEASLLY IILFASLWAV FSNIVLMCLY YYNVQESKRL SWKAENLRKM KNVNYTLSKK 240
241 FQVEENVKII KYLQVMSSML VFLIFFVIIF IVVPRVYLGS KTYSGQVMIS LFDINLALGA 300
301 ILIPSVCVLH LRKTRDMPFS GKIHCLNKRR DDRQVNPITV FEDVTKSYFD QFQTSWR
|
| Detection Method: |  |
| Confidence: | 41.045757 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
