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Protein Overview: DPB_ARATH

General Information:
Name(s) found: DPB_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Transcription factor-like protein DPB OS=Arabidopsis thaliana GN=DPB PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: G1/S transition of mitotic cell cycle [ISS]
    regulation of transcription, DNA-dependent [ISS]
    DNA endoreduplication [IMP]
    Molecular Function: protein binding [IPI]
    protein heterodimerization activity [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTGSNSNH NHHESNNNNN NPSTRSWGTA VSGQSVSTSG SMGSPSSRSE QTITVVTSTS  60
   61 DTTFQRLNNL DIQGDDAGSQ GASGVKKKKR GQRAAGPDKT GRGLRQFSMK VCEKVESKGR 120
  121 TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW 180
  181 RGLPRTSLSD IEELKNERLS LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS 240
  241 GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP 300
  301 NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT 360
  361 SSADTAPVKS PSLPGIMNSS MKPEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] FFAS03 0.972 Ribonucleotide reductase R2
    2 View Details [97..186] PSI-BLAST 30.0 Cell cycle transcription factor DP-2
    3 View Details [187..385] PSI-BLAST 40.69897 Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle