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Protein Overview: NAT12_ARATH

General Information:
Name(s) found: NAT12_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 709 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    plasma membrane [IDA]
    Biological Process: transport [IEA]
    Molecular Function: transmembrane transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSDPKPGP KPGPWPPTPE SAAMPPSSWA KKTGFRPKFS GETTATDSSS GQLSLPVRAK  60
   61 QQETQPDLEA GQTRLRPPPP VSAAVTNGET DKDKKEKPPP PPPGSVAVPV KDQPVKRRRD 120
  121 SDGVVGRSNG PDGANGSGDP VRRPGRIEET VEVLPQSMDD DLVARNLHMK YGLRDTPGLV 180
  181 PIGFYGLQHY LSMLGSLILV PLVIVPAMGG SHEEVANVVS TVLFVSGITT LLHTSFGSRL 240
  241 PLIQGPSFVF LAPALAIINS PEFQGLNGNN NFKHIMRELQ GAIIIGSAFQ AVLGYSGLMS 300
  301 LILRLVNPVV VAPTVAAVGL SFYSYGFPLV GKCLEIGVVQ ILLVIIFALY LRKISVLSHR 360
  361 IFLIYAVPLS LAITWAAAFL LTETGAYTYK GCDPNVPVSN VVSTHCRKYM TRMKYCRVDT 420
  421 SHALSSAPWF RFPYPLQWGV PLFNWKMAFV MCVVSVIASV DSVGSYHASS LLVASRPPTR 480
  481 GVVSRAIGLE GFTSVLAGLW GTGTGSTTLT ENVHTIAVTK MGSRRVVELG ACVLVIFSLV 540
  541 GKVGGFLASI PQVMVASLLC FMWAMFTALG LSNLRYSEAG SSRNIIIVGL SLFFSLSVPA 600
  601 YFQQYGISPN SNLSVPSYYQ PYIVSSHGPF KSQYKGMNYV MNTLLSMSMV IAFIMAVILD 660
  661 NTVPGSKQER GVYVWSDSET ATREPALAKD YELPFRVGRF FRWVKWVGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] MSA 81.221997 View MSA. No confident structure predictions are available.
    2 View Details [173..240] deduced N/A No confident structure predictions are available.
    3 View Details [241..709] PSI-BLAST 17.69897 Cytochrome O ubiquinol oxidase, subunit I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  8.24398014668904 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  8.08849452849835 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  7.42160577074767 bayes_pls_golite062009
  • transporter activity
    		•  4.2806100513341 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.19885907933483 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  4.09889747645813 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.04906705514063 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.02368756819781 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.98341278118156 bayes_pls_golite062009
  • catalytic activity
    		•  1.95966890211023 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  1.27735515053931 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.2337539211606 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.803860393147327 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.803860393147327 bayes_pls_golite062009
  • cytochrome-c oxidase activity
    		•  0.803860393147327 bayes_pls_golite062009
  • binding
    		•  0.666039242029224 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.349031670056176 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.336122020727214 bayes_pls_golite062009
  • protein binding
    		•  0.0827883348198969 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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