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Protein Overview: RNPA_COXBU

General Information:
Name(s) found: RNPA_COXBU [Swiss-Prot]
Description(s) found:
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  • gi|29655203|ref|NP_820895.1| ribonuclease P protein component [Coxiella burnetii RSA 493] [NCBI NR]
  • gi|29542475|gb|AAO91409.1| ribonuclease P protein component [Coxiella burnetii RSA 493] [NCBI NR]
  • Ribonuclease P protein component OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=rnpA PE=3 SV=1 [Swiss-Prot]
  • ribonuclease P protein component [Coxiella burnetii RSA 493]gi|29542475|gb|AAO91409.1| ribonuclease P protein component [Coxiella burnetii RSA 493]gi|2126372|pir||I40652 RNase P protein component - Coxiella burnetiigi|1173098|sp|P45648|RNPA_COXBU Ribon [nrdb_11152004_Chlamydomonas]
  • ribonuclease P protein component [Coxiella burnetii RSA 493] [nr-271106-contam.fasta]
    • Organism: Coxiella burnetii RSA 493
    Length: 121 amino acids

    Gene Ontology:
    Cellular Component: nucleolar ribonuclease P complex [ISSLink to PubMed article]
    Biological Process: RNA processing [ISSLink to PubMed article]
    Molecular Function: ribonuclease P activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGFSVGWR IRTTAEFRRI YAARQRIIGR YYLLYYRENE IKHSRLGVVA SKRNVRKAVW  60
   61 RNRVRRVVKE AFRIRKKDLP AFDIVVVAKA SSVEADNKEL YECINKLFTQ LEKQSKRSSS 120
  121 V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] PSI-BLAST 22.39794 RNASE P PROTEIN FROM BACILLUS SUBTILIS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • tRNA-specific ribonuclease activity
    		•  6.1454778021122 bayes_pls_golite062009
  • ribonuclease P activity
    		•  5.34408239201797 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  3.49304472389303 bayes_pls_golite062009
  • RNA binding
    		•  2.94550290381601 bayes_pls_golite062009
  • structural molecule activity
    		•  2.91017901273919 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  2.16830676862423 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  1.94887328847363 bayes_pls_golite062009
  • exoribonuclease activity
    		•  1.90081280972069 bayes_pls_golite062009
  • mRNA binding
    		•  1.42024615739664 bayes_pls_golite062009
  • ribonuclease activity
    		•  1.31550811238109 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.20748032530392 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.05662964529454 bayes_pls_golite062009
  • binding
    		•  0.907487229190259 bayes_pls_golite062009
  • catalytic activity
    		•  0.878454819018611 bayes_pls_golite062009
  • DNA binding
    		•  0.828609700556836 bayes_pls_golite062009
  • nuclease activity
    		•  0.69721312877891 bayes_pls_golite062009
  • 3'-5' exonuclease activity
    		•  0.477960254167 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle