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Protein Overview: RUVA_PSEAE

General Information:
Name(s) found: RUVA_PSEAE [Swiss-Prot]
Description(s) found:
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  • gi|9946873|gb|AAG04355.1|AE004530_8 Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PAO1] [NCBI NR]
  • gi|15596163|ref|NP_249657.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PAO1] [NCBI NR]
  • Holliday junction ATP-dependent DNA helicase RuvA OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ruvA PE=3 SV=1 [Swiss-Prot]
  • Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PAO1]gi|9946873|gb|AAG04355.1| Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PAO1]gi|2498872|sp|Q51425|RUVA_PSEAE Holliday junction DNA helicase ruvAgi|32040974|ref|ZP_00138557.1 [nrdb_11152004_Chlamydomonas]
  • Holliday junction binding protein [Pseudomonas aeruginosa] [nr-271106-contam.fasta]
  • Holliday junction DNA helicase motor protein [Pseudomonas aeruginosa PAO1] [nr-271106-contam.fasta]
  • Holliday junction DNA helicase RuvA [Pseudomonas aeruginosa PAO1] [nr-271106-contam.fasta]
  • junction DNA helicase RuvA[Pseudomonas aeruginosa PAO1 PAO1-UW] [P_aeruginosa_PAO1_PGD-contam.fasta]
    • Organism: Pseudomonas aeruginosa PAO1
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGRLRGTLA EKQPPHLILD VNGVGYEVEV PMTTLYRLPS VGEPVTLHTH LVVREDAHLL  60
   61 YGFAEKRERE LFRELIRLNG VGPKLALALM SGLEVDELVR CVQAQDTSTL VKIPGVGKKT 120
  121 AERLLVELKD RFKAWENMPT IAPLVMEPRA SATVSSAEAD AVSALIALGF KPQEASRAVA 180
  181 AVPGEDLSSE EMIRQALKGM V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] PSI-BLAST 68.0 DNA helicase RuvA subunit, C-terminal domain; DNA helicase RuvA subunit, middle domain; DNA helicase RuvA subunit, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • four-way junction helicase activity
    		•  6.5377357736202 bayes_pls_golite062009
  • DNA helicase activity
    		•  4.17140899815273 bayes_pls_golite062009
  • endodeoxyribonuclease activity
    		•  3.43738564958931 bayes_pls_golite062009
  • helicase activity
    		•  3.41619150983834 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  3.18777140839084 bayes_pls_golite062009
  • excinuclease ABC activity
    		•  2.75922711242844 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.99569639221804 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.68542948433544 bayes_pls_golite062009
  • binding
    		•  1.60192408330567 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  1.58506920916947 bayes_pls_golite062009
  • DNA binding
    		•  1.33645375386113 bayes_pls_golite062009
  • endonuclease activity
    		•  1.07194065760938 bayes_pls_golite062009
  • damaged DNA binding
    		•  1.01799678384131 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
    		•  1.01626429465845 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.83740886071361 bayes_pls_golite062009
  • structural molecule activity
    		•  0.53636537261201 bayes_pls_golite062009
  • nuclease activity
    		•  0.29926900436997 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  0.0954216620147701 bayes_pls_golite062009
  • exonuclease activity
    		•  0.0152988330656798 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle