YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: RS9_RAT

General Information:
Name(s) found: RS9_RAT [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|52788199|sp|P29314.4|RS9_RAT RecName: Full=40S ribosomal protein S9 [NCBI NR]
  • gi|38014582|gb|AAH60560.1| Ribosomal protein S9 [Rattus norvegicus] [NCBI NR]
  • gi|149029793|gb|EDL84925.1| rCG56820 [Rattus norvegicus] [NCBI NR]
  • gi|110347598|ref|NP_112370.2| ribosomal protein S9 [Rattus norvegicus] [NCBI NR]
  • 40S ribosomal protein S9 OS=Rattus norvegicus GN=Rps9 PE=1 SV=4 [Swiss-Prot]
  • PREDICTED: similar to ribosomal protein S9-like [Pan troglodytes]gi|38014582|gb|AAH60560.1| Unknown (protein for MGC:72792) [Rattus norvegicus]gi|33504483|ref|NP_084043.1| ribosomal protein S9-like [Mus musculus]gi|14141193|ref|NP_001004.2| ribosomal p [nrdb_11152004_Chlamydomonas]
  • 40S ribosomal protein S9 [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • ribosomal protein S9 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • rCG56820 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Ribosomal protein S9 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Rps9 40S ribosomal protein S9 [rat-ipi-250309-contam.fasta]
  • 40S ribosomal protein S9 OS=Rattus norvegicus GN=Rps9 [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 194 amino acids

    Gene Ontology:
    Cellular Component: ribonucleoprotein complex [UNKNOWN][ISS]
    cytoplasm [UNKNOWN][IEA]
    cytosolic small ribosomal subunit [UNKNOWN][IDA]
    cytosol [UNKNOWN]
    small ribosomal subunit [IEA]
    nucleolus [UNKNOWN]
    ribosome [IEA]
    intracellular [IEA]
    Biological Process: biological_process [ND]
    positive regulation of cell proliferation [UNKNOWN]
    translational elongation [UNKNOWN]
    translation [UNKNOWN][IEA]
    Molecular Function: translation regulator activity [UNKNOWN]
    protein binding [UNKNOWN]
    structural constituent of ribosome [IEA]
    rRNA binding [IEA]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVARSWVCR KTYVTPRRPF EKSRLDQELK LIGEYGLRNK REVWRVKFTL AKIRKAAREL  60
   61 LTLDEKDPRR LFEGNALLRR LVRIGVLDEG KMKLDYILGL KIEDFLERRL QTQVFKLGLA 120
  121 KSIHHARVLI RQRHIRVRKQ VVNIPSFIVR LDSQKHIDFS LRSPYGGGRP GRVKRKNAKK 180
  181 GQGGAGAGDD EEED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] PSI-BLAST 39.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle