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Protein Overview: gi|21311767

General Information:
Name(s) found: gi|21311767 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|21311767|gb|AAM46844.1|AF495874_1 coatomer delta subunit [Plasmodium falciparum] [NCBI NR]
    • Organism: Plasmodium falciparum
    Length: 487 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    Biological Process: retrograde vesicle-mediated transport, Golgi to ER [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLSAVIST KSKILVSRQF RNISKCDLDS LTIPFHNLIE RERSDHTYIE TDKVRYVYQP  60
   61 LDNIYIFLIT NINSNIIEDL EIIKVLSQII QDICQGNINE STILKKCFTI IFYIDELIKN 120
  121 GVREIVNSNQ IKTYIEMESH EEKLQTIIRE NKEKEEKERR KFIASKLEKN RQKQSKVSSN 180
  181 SFLSNDLINN LEYTNNIDMY KTEEQDIIDE SFNTYKGMQL TSNKKENIRI LNVVEHKVDT 240
  241 KPHINVNSIF DKPINIIITE NIICTLSSEG TLCDLDIQGT FNLQINNHNY SKVIVELDNE 300
  301 YSEKAKIHPI LDKNKYNSNI LELKDKSKNF RINTIYPLLK WKINHINDSY IPLNISCWPC 360
  361 EDNESTLLSL EIENKRNNND ELIYDLNVNL MCPSAHKPQI ISNDKGIIEH DGVLLAWKVD 420
  421 ELKNNQSCQI EMSIQANPES VFPFSVEAKS NMLAHKLNVL KVYDEDTKKD IEYEIKKNIT 480
  481 YLFTINK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 82.221849 AP1 clathrin adaptor core
    2 View Details [345..487] PSI-BLAST 54.39794 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle