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Protein Overview: gi|7494400

General Information:
Name(s) found: gi|7494400 [NCBI NR]
Description(s) found:
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  • pir||C71603 pseudouridine synthetase (RsuA fam.) PFB0890c - malaria parasite (Plasmodium falciparum) [NCBI NR]
  • pseudouridine synthetase, putative [Plasmodium falciparum 3D7]gi|3845303|gb|AAC71967.1| pseudouridine synthetase, putative [Plasmodium falciparum 3D7]gi|7494400|pir||C71603 pseudouridine synthetase (RsuA fam.) PFB0890c - malaria parasite (Plasmodium fal [nrdb_11152004_Chlamydomonas]
    • Organism: Plasmodium falciparum
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: apicoplast [ISSLink to PubMed article]
    Biological Process: rRNA modification [ISSLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICSNLSLLR YVHLVYYFII ISFCIHNNIS CFNVNLTKTN EDANIIRLNK LISMKRNISR  60
   61 RKSDEFIKDG KVKINNKIIT NPGTHVHIGK DSLRIYDKKI KLTNIINMIK QNENKLHKWI 120
  121 VLHKPKGLLC TSNDEKNRKS IYTLFPEEML QKYRLVTVGR LDRNTSGVLL LTNDYAWVNK 180
  181 LTHPKYQRIR TYRVHIEGPV KMNALKELAR GIYLEEDEKT QPKKIYNYKE SREKSNIDDK 240
  241 KKKKMSKMKK KTNPAFIEIL REEKIKIKED TKKITVLNIS IKEGRNRQIR KMFQQINQPV 300
  301 IKIKRTSFEN ITLKNIYFPK QYRELNQKEV NDLKLRNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..338] PSI-BLAST 40.30103 Crystal structure of pseudouridylate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pseudouridine synthase activity
    		•  5.60483019625575 bayes_pls_golite062009
  • intramolecular transferase activity
    		•  4.62815459483632 bayes_pls_golite062009
  • isomerase activity
    		•  3.43067391737824 bayes_pls_golite062009
  • catalytic activity
    		•  2.39224964671205 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  1.93805098366683 bayes_pls_golite062009
  • structural molecule activity
    		•  1.65902435754631 bayes_pls_golite062009
  • RNA binding
    		•  0.351909066993469 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle