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Protein Overview: gi|11275529, gi|...

General Information:
Name(s) found: gi|34895502 [NCBI NR]
gi|215687245 [NCBI NR]
gi|115434298 [NCBI NR]
gi|113531438 [NCBI NR]
gi|11275529 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|34895502|ref|NP_909094.1| putative mannose-6-phosphate isomerase [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215687245|dbj|BAG91810.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115434298|ref|NP_001041907.1| Os01g0127900 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113531438|dbj|BAF03821.1| Os01g0127900 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|11275529|dbj|BAB18294.1| putative mannose-6-phosphate isomerase [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 428 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPTPPPPE EEPSSPSLRL RCAVQHYEWG RRGEASLVAR LSDANADDHG PDPARPYAEL  60
   61 WMGTHPSAPS SLLADGLLRD WLARHPAALG PAVAARWGGD LPFLFKVLSV AKALSIQAHP 120
  121 DKDLAEVLHA LRPATYKDGN HKPEMAIAVT EFRVLCGFAG IQELKDVLRT VPEVEDLVGP 180
  181 EDAAKLLSVK EYHGVNEVKS CLRSAFTKLM TASKEAVSEA ITKLIFRLNA ESKVRTLTEK 240
  241 ENLVLSLEKQ YPEDVGVLSA FFFNYIKLSP GEALYIGANE PHAYLSGECI ECMATSDNVV 300
  301 RAGLTPKYRD VQTLCSMLTY KQVFPEILRG VPVQPYVRRY TPPFDEFEVD CCSLPPGELV 360
  361 VISPVSGPSV YLVMAGEGEI QVDSMPNGEK SKQGDVFFVP AYTEVKFSAS GPECMQLYRA 420
  421 GVNSRFFN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..428] PSI-BLAST 113.0 HUMAN RANTES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  1.86690435826277 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.64913898350018 bayes_pls_golite062009
  • DNA binding
    		•  1.57178406956273 bayes_pls_golite062009
  • binding
    		•  1.54596514444405 bayes_pls_golite062009
  • transcription factor activity
    		•  0.937392765385803 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.8581504516071 bayes_pls_golite062009
  • catalytic activity
    		•  0.401988496917198 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  0.353173877157675 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  0.348782780143283 bayes_pls_golite062009
  • protein binding
    		•  0.110960530780648 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle