| Protein: | gi|11275529, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 428 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11275529, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
480.0 | [0..1] | [422..1] |
|
Region A: Residues: [1-428] |
1 11 21 31 41 51
| | | | | |
1 MAGPTPPPPE EEPSSPSLRL RCAVQHYEWG RRGEASLVAR LSDANADDHG PDPARPYAEL 60
61 WMGTHPSAPS SLLADGLLRD WLARHPAALG PAVAARWGGD LPFLFKVLSV AKALSIQAHP 120
121 DKDLAEVLHA LRPATYKDGN HKPEMAIAVT EFRVLCGFAG IQELKDVLRT VPEVEDLVGP 180
181 EDAAKLLSVK EYHGVNEVKS CLRSAFTKLM TASKEAVSEA ITKLIFRLNA ESKVRTLTEK 240
241 ENLVLSLEKQ YPEDVGVLSA FFFNYIKLSP GEALYIGANE PHAYLSGECI ECMATSDNVV 300
301 RAGLTPKYRD VQTLCSMLTY KQVFPEILRG VPVQPYVRRY TPPFDEFEVD CCSLPPGELV 360
361 VISPVSGPSV YLVMAGEGEI QVDSMPNGEK SKQGDVFFVP AYTEVKFSAS GPECMQLYRA 420
421 GVNSRFFN
|
| Detection Method: |  |
| Confidence: | 113.0 |
| Match: | 1pmiA |
| Description: | HUMAN RANTES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 1.86690435826277 | bayes_pls_golite062009 |
| nucleic acid binding | 1.64913898350018 | bayes_pls_golite062009 |
| DNA binding | 1.57178406956273 | bayes_pls_golite062009 |
| binding | 1.54596514444405 | bayes_pls_golite062009 |
| transcription factor activity | 0.937392765385803 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity | 0.8581504516071 | bayes_pls_golite062009 |
| catalytic activity | 0.401988496917198 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 0.353173877157675 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, interconverting aldoses and ketoses | 0.348782780143283 | bayes_pls_golite062009 |
| protein binding | 0.110960530780648 | bayes_pls_golite062009 |
