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Protein Overview: RS14_ECOLI

General Information:
Name(s) found: RS14_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|84028290|sp|P0AG59.2|RS14_ECOLI RecName: Full=30S ribosomal protein S14 [NCBI NR]
  • pir||R3EC14 ribosomal protein S14 [validated] - Escherichia coli (strain K-12) [NCBI NR]
  • gi|606241|gb|AAA58104.1| 30S ribosomal subunit protein S14 [Escherichia coli] [NCBI NR]
  • pir||H85995 30S ribosomal subunit protein S14 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||D91150 30S ribosomal subunit protein S14 [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209757176|gb|ACI76900.1| 30S ribosomal subunit protein S14 [Escherichia coli] [NCBI NR]
  • gi|209757174|gb|ACI76899.1| 30S ribosomal subunit protein S14 [Escherichia coli] [NCBI NR]
  • gi|209757172|gb|ACI76898.1| 30S ribosomal subunit protein S14 [Escherichia coli] [NCBI NR]
  • gi|209757170|gb|ACI76897.1| 30S ribosomal subunit protein S14 [Escherichia coli] [NCBI NR]
  • gi|209757168|gb|ACI76896.1| 30S ribosomal subunit protein S14 [Escherichia coli] [NCBI NR]
  • gi|116666613|pdb|1VS7|N Chain N, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains [NCBI NR]
  • gi|116666561|pdb|1VS5|N Chain N, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains [NCBI NR]
  • 30S ribosomal protein S14 - Escherichia coli [Swiss-Prot]
  • 30S ribosomal subunit protein S14 [Escherichia coli K12]gi|15833426|ref|NP_312199.1| 30S ribosomal subunit protein S14 [Escherichia coli O157:H7]gi|30065392|ref|NP_839563.1| 30S ribosomal subunit protein S14 [Shigella flexneri 2a str. 2457T]gi|26249895 [nrdb_11152004_Chlamydomonas]
  • 30S ribosomal protein S14 [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Chain N, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is [nr-271106-contam.fasta]
  • 30S ribosomal protein S14 OS=Escherichia coli (strain K12) GN=rpsN PE=1 SV=2 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 101 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQSMKARE VKRVALADKY FAKRAELKAI ISDVNASDED RWNAVLKLQT LPRDSSPSRQ  60
   61 RNRCRQTGRP HGFLRKFGLS RIKVREAAMR GEIPGLKKAS W

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 32.69897 No description for 1vs5N was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  6.46626105355287 bayes_pls_golite062009
  • structural molecule activity
    		•  5.9950507001335 bayes_pls_golite062009
  • binding
    		•  2.38688645545392 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.92713003801314 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.78943375122683 bayes_pls_golite062009
  • DNA binding
    		•  1.76229029583767 bayes_pls_golite062009
  • protein binding
    		•  1.60194768638501 bayes_pls_golite062009
  • transcription factor activity
    		•  1.15014535964426 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  0.99776558176649 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.36307842011603 bayes_pls_golite062009
  • transcription activator activity
    		•  0.30551145939731 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.2038327599988 bayes_pls_golite062009
  • ligand-dependent nuclear receptor activity
    		•  0.15407483499486 bayes_pls_golite062009
  • catalytic activity
    		•  0.101795606736461 bayes_pls_golite062009
  • transcription factor binding
    		•  0.0507779401401098 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle