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Protein Overview: gi|29140794, gi|...

General Information:
Name(s) found: gi|29140794 [NCBI NR]
gi|29136418 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|29140794|ref|NP_804136.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] [NCBI NR]
  • gi|29136418|gb|AAO67985.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi Ty2] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. Ty2
    Length: 886 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQGLEALL RPKSIAVIGA SMKPHRAGYL MMRNLLAGGF NGPVLPVTPA WKAVLGVMAW  60
   61 PDIASLPFTP DLAILCTNAS RNLALLDALG AKGCKTCIIL SAPTSQHEEL LASARHYKMR 120
  121 LLGPNSLGLL APWQGLNASF SPVPIKQGKL AFISQSAAVS NTILDWAQQR EMGFSYFIAL 180
  181 GDSLDIDVDE LLDYLARDSK TSAILLYLEQ LSDARRFVSA ARSASRNKPI LVIKSGRSPA 240
  241 AQRLLNTSAG MDPAWDAAIQ RAGLLRVQDT HELFSAVETL SHMRPLHGDR LMIISNGAAP 300
  301 AALALDELWS RNGKLATLSE ETCLQLRQTL PAHIDIANPL DLCDDASSEH YVKTLDILLA 360
  361 SQDFDALMVI HSPSAAAPGT ESAHALIETI KRHPRGKFVT LLTNWCGEFS SQEARRLFSE 420
  421 AGLPTYRTPE GTITAFMHMV EYRRNQKQLR ETPALPSNLT SNTAEAHNLL QRAIAEGATS 480
  481 LDTHEVQPIL HAYGLHTLPT WIASDSAEAV HIAEQIGYPV ALKLRSPDIP HKSEVQGVML 540
  541 YLRTASEVQQ AANAIFDRVK MAWPQARIHG LLVQSMANRA GAQELRVVVE HDPVFGPLIM 600
  601 LGEGGVEWRP EEQAVVALPP LNMNLARYLV IQGIKQRKIR ARSALRPLDI VGLSQLLVQV 660
  661 SNLIVDCPEI QRLDIHPLLA SASEFTALDV TLDIAPFDGD NESRLAVRPY PHQLEEWVEM 720
  721 KNGDRCLFRP ILPEDEPQLR QFIAQVTKED LYYRYFSEIN EFTHEDLANM TQIDYDREMA 780
  781 FVAVRRMDNA EEILGVTRAI SDPDNVDAEF AVLVRSDLKG LGLGRRLMEK LIAYTRDHGL 840
  841 KRLNGITMPN NRGMVALARK LGFQVDIQLD EGIVGLTLNL AKCDES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] PSI-BLAST 101.0 No description for 2csuA was found.
    2 View Details [103..449] PSI-BLAST 30.39794 Crystal structure of pig GTP-specific succinyl-CoA synthetase in complex with GTP
    3 View Details [450..682] PSI-BLAST 31.39794 Crystal structure of PH1788 from Pyrococcus horikoshii Ot3
    4 View Details [683..886] PSI-BLAST 34.30103 Crystal Structure of Biotin Carboxylase Domain of Acetyl-coenzyme A Carboxylase from Saccharomyces cerevisiae in Complex with Soraphen A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ligase activity
    		•  2.65834437588388 bayes_pls_golite062009
  • catalytic activity
    		•  2.5009559386228 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  2.03020006934407 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  1.97356692026797 bayes_pls_golite062009
  • succinate-CoA ligase activity
    		•  1.97320026759321 bayes_pls_golite062009
  • CoA-ligase activity
    		•  1.70650205723619 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  1.65304911485061 bayes_pls_golite062009
  • ATP citrate synthase activity
    		•  1.64885390203992 bayes_pls_golite062009
  • succinate-CoA ligase (ADP-forming) activity
    		•  1.55053478055591 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  1.47371551641074 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  1.34583813987229 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  0.474291950095735 bayes_pls_golite062009
  • biotin carboxylase activity
    		•  0.434630727705062 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.311469287876404 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.239594107637156 bayes_pls_golite062009
  • glutathione synthase activity
    		•  0.158287661667506 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle