Protein Overview: sptl-1

General Information:
Name(s) found:	sptl-1 / CE37749 [WormBase]
Description(s) found: Found 15 descriptions. SHOW ALL	WBGene00016020 locus:sptl-1 Serine palmitoyltransferase 1 status:Confirmed UniProt:P91079 protein_id:CCD65324.1 [WormBase]
Organism:	Caenorhabditis elegans
Length:	434 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	locomotory behavior [IMP ] nematode larval development [IMP ] embryonic development ending in birth or egg hatching [IMP ] positive regulation of growth rate [IMP] tetrapyrrole biosynthetic process [IEA] biotin biosynthetic process [IEA] biosynthetic process [IEA] growth [IMP ]
Molecular Function:	pyridoxal phosphate binding [IEA] transferase activity, transferring nitrogenous groups [IEA] glycine C-acetyltransferase activity [IEA] 5-aminolevulinate synthase activity [IEA] transferase activity [IEA] 8-amino-7-oxononanoate synthase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNRSKRQQE KLSKKLTERQ KDELIADWTP EPLVPETPQD HPVLNPKYAD GKMTKDVSID  60
   61 GEKYLNMAST NFLSFIGVKR IEDRAKQTIF KYGVGSCGPR GFYGTVDVHL DLEKELAKFM 120
  121 GCEEAVLYSY GFATVSSAIP AYAKKGDVIF VDEGVNFAIQ KGLQASRSRV EYFKHNDMEH 180
  181 LERLLLEQEQ RDKKDPKKAK SVRRFIVVEG LYVNYADLCP LPKIIEFKWR FKVRVFIDES 240
  241 WSFGVIGKTG RGVTEHFNVP MEDVDMVMAS LENALASTGG FCVGRSYVVG HQRLSGLGYC 300
  301 FSASLPPLLA TAASEAISII DEEPSRVQKV TEMAINGQKK LQDALSGSKF SLQGCPESPM 360
  361 KHIYYNGEDE EKQLDTFVET VFTKNHLLLT RARYLDKDEL FKIRPSIRVM FQHDLTEEEI 420
  421 QRAVDAIRVV AHKF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
serine C-palmitoyltransferase activity	9.1839236553858	bayes_pls_golite062009
C-palmitoyltransferase activity	9.1839236553858	bayes_pls_golite062009
C-acyltransferase activity	4.29379571948906	bayes_pls_golite062009
catalytic activity	2.29878871754893	bayes_pls_golite062009
transferase activity, transferring nitrogenous groups	1.28316822767388	bayes_pls_golite062009
transaminase activity	1.24990480711889	bayes_pls_golite062009
L-aspartate:2-oxoglutarate aminotransferase activity	1.08684392183114	bayes_pls_golite062009
transcription regulator activity	1.07873942461292	bayes_pls_golite062009
DNA binding	0.886628214497634	bayes_pls_golite062009
nucleic acid binding	0.814403324199462	bayes_pls_golite062009
structural molecule activity	0.811208803619077	bayes_pls_golite062009
transferase activity	0.737426388870721	bayes_pls_golite062009
binding	0.661198018681765	bayes_pls_golite062009
transcription factor activity	0.615294010373048	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..434]	PSI-BLAST	78.522879	2-amino-3-ketobutyrate CoA ligase

Protein Overview: sptl-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: