Protein Overview: gi|42407979, gi|...

General Information:
Name(s) found:	gi\|50947885 [NCBI NR] gi\|42407979 [NCBI NR] gi\|42407877 [NCBI NR] gi\|115477453 [NCBI NR] gi\|113624291 [NCBI NR]
Description(s) found: Found 8 descriptions. SHOW ALL	gi\|50947885\|ref\|XP_483470.1\| putative uridine kinase/uracil phosphoribosyltransferase [Oryza sativa (japonica cultivar-group)] [NCBI NR] gi\|42407979\|dbj\|BAD09117.1\| putative uridine kinase/uracil phosphoribosyltransferase [Oryza sativa Japonica Group] [NCBI NR] gi\|42407877\|dbj\|BAD09018.1\| putative uridine kinase/uracil phosphoribosyltransferase [Oryza sativa Japonica Group] [NCBI NR] gi\|115477453\|ref\|NP_001062322.1\| Os08g0530000 [Oryza sativa (japonica cultivar-group)] [NCBI NR] gi\|113624291\|dbj\|BAF24236.1\| Os08g0530000 [Oryza sativa Japonica Group] [NCBI NR]
Organism:	Oryza sativa Japonica Group
Length:	491 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAAMESAVG PHFSGLRLDS RRLSSSSLPT SPSAASSNGC GGNDAPAAVN GFAPPPPPSA  60
   61 AAAAEEGSKQ PFVIGVSGGT ASGKTTVCDM IIQQLHDHRV VLVNQDSFYR GLTEEESDRV 120
  121 QDYNFDHPDA FDTEQLLECM GQLKSGLSVN IPIYDFKNHR RCSESFRKVN ASDVIILEGI 180
  181 LVFHDQRVRD LMDMKIFVDT DADIRLARRI RRDTVERGRD VISVLEQYGR FVKPAFDDFV 240
  241 LPSKKYADVI IPRGGDNHVA IDLIVQHIRT KLGQHDLCKI YPNVYVVNTT FQIRGMHTLI 300
  301 RDRDIATPDF VFYSDRLIRL VVEHGLGHLP FTEKQIVTPT GSTYMGVDFC KKLCGVSIIR 360
  361 SGESMENALR ACCKGIKIGK ILIHRDGDNG QQLIYHKFPL DIAERHVLLM DPVLGTGNSA 420
  421 NQAIELLISS GVPEERIMFL NLISAPEGVH CVCKRFPRLK IVTSEIETGL NEEYRVIPGL 480
  481 GEYGDRYFGT D

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..279]	PSI-BLAST	40.0	Crystal structure of human uridine-cytidine kinase 2 complexed with a feedback-inhibitor, CTP
2	View Details	[280..491]	PSI-BLAST	49.221849	Uracil PRTase

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
nucleobase, nucleoside, nucleotide kinase activity	3.66392587433723	bayes_pls_golite062009
nucleotide kinase activity	2.24094813695083	bayes_pls_golite062009
binding	2.0914769303586	bayes_pls_golite062009
kinase activity	2.0779386406753	bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor	1.96697952975573	bayes_pls_golite062009
nucleic acid binding	1.08697924060619	bayes_pls_golite062009
catalytic activity	1.00104173493322	bayes_pls_golite062009
DNA binding	0.702147676354075	bayes_pls_golite062009
adenylate kinase activity	0.447752711852745	bayes_pls_golite062009
hydrolase activity	0.420858111948277	bayes_pls_golite062009
transcription regulator activity	0.287777990975748	bayes_pls_golite062009
helicase activity	0.0775311459068899	bayes_pls_golite062009
nucleotide binding	0.0593371872166591	bayes_pls_golite062009
purine nucleotide binding	0.0285347443435678	bayes_pls_golite062009

2

Term	Confidence	Notes
uracil phosphoribosyltransferase activity	3.97944228585882	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	3.91023158228049	bayes_pls_golite062009
adenine phosphoribosyltransferase activity	3.07502596276449	bayes_pls_golite062009
hypoxanthine phosphoribosyltransferase activity	2.97347277288245	bayes_pls_golite062009
transferase activity	2.73727660668741	bayes_pls_golite062009
transferase activity, transferring pentosyl groups	2.53679639481311	bayes_pls_golite062009
catalytic activity	2.30431811394775	bayes_pls_golite062009
nucleobase binding	1.70525606708275	bayes_pls_golite062009
purine binding	1.24786927434743	bayes_pls_golite062009
ribose phosphate diphosphokinase activity	0.947697983706416	bayes_pls_golite062009
diphosphotransferase activity	0.749909396904601	bayes_pls_golite062009
binding	0.730385736169604	bayes_pls_golite062009
nucleic acid binding	0.552133387792911	bayes_pls_golite062009
DNA binding	0.439741935655503	bayes_pls_golite062009
transcription regulator activity	0.396538943915776	bayes_pls_golite062009
amidophosphoribosyltransferase activity	0.360901350940423	bayes_pls_golite062009
orotate phosphoribosyltransferase activity	0.148898393751978	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle