| Protein: | gi|42407979, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 491 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42407979, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..1] | [491..8] |
|
Region A: Residues: [1-279] |
1 11 21 31 41 51
| | | | | |
1 MDAAMESAVG PHFSGLRLDS RRLSSSSLPT SPSAASSNGC GGNDAPAAVN GFAPPPPPSA 60
61 AAAAEEGSKQ PFVIGVSGGT ASGKTTVCDM IIQQLHDHRV VLVNQDSFYR GLTEEESDRV 120
121 QDYNFDHPDA FDTEQLLECM GQLKSGLSVN IPIYDFKNHR RCSESFRKVN ASDVIILEGI 180
181 LVFHDQRVRD LMDMKIFVDT DADIRLARRI RRDTVERGRD VISVLEQYGR FVKPAFDDFV 240
241 LPSKKYADVI IPRGGDNHVA IDLIVQHIRT KLGQHDLCK
|
| Detection Method: |  |
| Confidence: | 40.0 |
| Match: | 1udwA |
| Description: | Crystal structure of human uridine-cytidine kinase 2 complexed with a feedback-inhibitor, CTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleobase, nucleoside, nucleotide kinase activity | 3.66392587433723 | bayes_pls_golite062009 |
| nucleotide kinase activity | 2.24094813695083 | bayes_pls_golite062009 |
| binding | 2.0914769303586 | bayes_pls_golite062009 |
| kinase activity | 2.0779386406753 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.96697952975573 | bayes_pls_golite062009 |
| nucleic acid binding | 1.08697924060619 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA binding | 0.702147676354075 | bayes_pls_golite062009 |
| adenylate kinase activity | 0.447752711852745 | bayes_pls_golite062009 |
| hydrolase activity | 0.420858111948277 | bayes_pls_golite062009 |
| transcription regulator activity | 0.287777990975748 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| nucleotide binding | 0.0593371872166591 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.0285347443435678 | bayes_pls_golite062009 |
|
Region A: Residues: [280-491] |
1 11 21 31 41 51
| | | | | |
1 IYPNVYVVNT TFQIRGMHTL IRDRDIATPD FVFYSDRLIR LVVEHGLGHL PFTEKQIVTP 60
61 TGSTYMGVDF CKKLCGVSII RSGESMENAL RACCKGIKIG KILIHRDGDN GQQLIYHKFP 120
121 LDIAERHVLL MDPVLGTGNS ANQAIELLIS SGVPEERIMF LNLISAPEGV HCVCKRFPRL 180
181 KIVTSEIETG LNEEYRVIPG LGEYGDRYFG TD
|
| Detection Method: | |
| Confidence: | 49.221849 |
| Match: | 1bd3D |
| Description: | Uracil PRTase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| uracil phosphoribosyltransferase activity | 3.97944228585882 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 3.91023158228049 | bayes_pls_golite062009 |
| adenine phosphoribosyltransferase activity | 3.07502596276449 | bayes_pls_golite062009 |
| hypoxanthine phosphoribosyltransferase activity | 2.97347277288245 | bayes_pls_golite062009 |
| transferase activity | 2.73727660668741 | bayes_pls_golite062009 |
| transferase activity, transferring pentosyl groups | 2.53679639481311 | bayes_pls_golite062009 |
| catalytic activity | 2.30431811394775 | bayes_pls_golite062009 |
| nucleobase binding | 1.70525606708275 | bayes_pls_golite062009 |
| purine binding | 1.24786927434743 | bayes_pls_golite062009 |
| ribose phosphate diphosphokinase activity | 0.947697983706416 | bayes_pls_golite062009 |
| diphosphotransferase activity | 0.749909396904601 | bayes_pls_golite062009 |
| binding | 0.730385736169604 | bayes_pls_golite062009 |
| nucleic acid binding | 0.552133387792911 | bayes_pls_golite062009 |
| DNA binding | 0.439741935655503 | bayes_pls_golite062009 |
| transcription regulator activity | 0.396538943915776 | bayes_pls_golite062009 |
| amidophosphoribosyltransferase activity | 0.360901350940423 | bayes_pls_golite062009 |
| orotate phosphoribosyltransferase activity | 0.148898393751978 | bayes_pls_golite062009 |
