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Protein Overview: gi|42408633, gi|...

General Information:
Name(s) found: gi|50946711 [NCBI NR]
gi|42408633 [NCBI NR]
gi|125603720 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|50946711|ref|XP_482883.1| putative dioscorin class A precursor [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42408633|dbj|BAD09854.1| putative dioscorin class A precursor [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125603720|gb|EAZ43045.1| hypothetical protein OsJ_27633 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTRLLVLL AAASLLLATA VPAARAQEET DHEEEFTYIS GDEKGPEHWG KLKPEWAQCG  60
   61 AGEMQSPIDL SHERVKLVRD LGYLDDSYRA AEASIVNRGH DIMVRFDGDA GSVVINGTAY 120
  121 YLRQLHWHSP TEHSVDGRRY DMELHMVHES AEKKAAVIGL LYEVGRPDRF LQKMEPYLKM 180
  181 IADKEDREEK VGMIDPRGAR GRASVYYRYM GSLTTPPCTQ GVVWTIVKRV RTVSRYQLDL 240
  241 LREAVHDEME NNARPLQAVN NRDISIFRPY PHKRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..275] PSI-BLAST 59.69897 Carbonic anhydrase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbonate dehydratase activity
    		•  2.35405414226159 bayes_pls_golite062009
  • binding
    		•  1.59667704693142 bayes_pls_golite062009
  • protein binding
    		•  1.30419076438266 bayes_pls_golite062009
  • catalytic activity
    		•  0.97285738666961 bayes_pls_golite062009
  • zinc ion binding
    		•  0.744428270762821 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.36067052386032 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.0641135521348118 bayes_pls_golite062009
  • hydro-lyase activity
    		•  0.0479238316186823 bayes_pls_golite062009
  • lyase activity
    		•  0.0337150119314038 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle