YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42408633, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTRLLVLL AAASLLLATA VPAARAQEET DHEEEFTYIS GDEKGPEHWG KLKPEWAQCG  60
   61 AGEMQSPIDL SHERVKLVRD LGYLDDSYRA AEASIVNRGH DIMVRFDGDA GSVVINGTAY 120
  121 YLRQLHWHSP TEHSVDGRRY DMELHMVHES AEKKAAVIGL LYEVGRPDRF LQKMEPYLKM 180
  181 IADKEDREEK VGMIDPRGAR GRASVYYRYM GSLTTPPCTQ GVVWTIVKRV RTVSRYQLDL 240
  241 LREAVHDEME NNARPLQAVN NRDISIFRPY PHKRY

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	275	0.99