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Protein Overview: gi|30253517, gi|...

General Information:
Name(s) found: gi|30260196 [NCBI NR]
gi|30253517 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30260196|ref|NP_842573.1| chromosomal replication initiation protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30253517|gb|AAP24059.1| chromosomal replication initiator protein DnaA [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 446 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA replication initiation [ISSLink to PubMed article]
    regulation of DNA replication [ISSLink to PubMed article]
    Molecular Function: DNA binding [ISSLink to PubMed article]
    DNA replication origin binding [ISSLink to PubMed article]
    ATP binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENISDLWNS ALKELEKKVS KPSYETWLKS TTAHNLKKDV LTITAPNEFA RDWLESHYSE  60
   61 LISETLYDLT GAKLAIRFII PQSQAEEEID LPPAKPNAAQ DDSNHLPQSM LNPKYTFDTF 120
  121 VIGSGNRFAH AASLAVAEAP AKAYNPLFIY GGVGLGKTHL MHAIGHYVIE HNPNAKVVYL 180
  181 SSEKFTNEFI NSIRDNKAVD FRNKYRNVDV LLIDDIQFLA GKEQTQEEFF HTFNALHEES 240
  241 KQIVISSDRP PKEIPTLEDR LRSRFEWGLI TDITPPDLET RIAILRKKAK AEGLDIPNEV 300
  301 MLYIANQIDS NIRELEGALI RVVAYSSLIN KDINADLAAE ALKDIIPNSK PKIISIYDIQ 360
  361 KAVGDVYQVK LEDFKAKKRT KSVAFPRQIA MYLSRELTDS SLPKIGEEFG GRDHTTVIHA 420
  421 HEKISKLLKT DTQLQKQVEE INDILK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 18.09691 Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state
    2 View Details [102..446] PSI-BLAST 26.39794 No description for 2hcbA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  5.01388683093589 bayes_pls_golite062009
  • signal transducer activity
    		•  3.71287818091202 bayes_pls_golite062009
  • molecular transducer activity
    		•  3.71287818091202 bayes_pls_golite062009
  • DNA binding
    		•  2.77608903097616 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.60508662944966 bayes_pls_golite062009
  • two-component response regulator activity
    		•  2.59441224418158 bayes_pls_golite062009
  • transcription factor activity
    		•  2.01247028577327 bayes_pls_golite062009
  • binding
    		•  1.66253490279439 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  1.7440092435568 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.24473801560965 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.835083234340837 bayes_pls_golite062009
  • DNA binding
    		•  0.482861189033644 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.313784136616883 bayes_pls_golite062009
  • helicase activity
    		•  0.113520297233174 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  0.0863785441153608 bayes_pls_golite062009
  • nucleotide binding
    		•  0.0188404002299471 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.0142207617615038 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.00410396371520677 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0038904924070306 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle