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Protein Overview: gi|30258463, gi|...

General Information:
Name(s) found: gi|30263819 [NCBI NR]
gi|30258463 [NCBI NR]
Description(s) found:
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  • gi|30263819|ref|NP_846196.1| transcription elongation factor NusA [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30258463|gb|AAP27682.1| N utilization substance protein A [Bacillus anthracis str. Ames] [NCBI NR]
  • N utilization substance protein A [Bacillus cereus ZK]gi|51975143|gb|AAU16693.1| N utilization substance protein A [Bacillus cereus ZK]gi|49479412|ref|YP_037877.1| N utilization substance protein A [Bacillus thuringiensis serovar konkukian str. 97-27]g [nrdb_11152004_Chlamydomonas]
  • transcription elongation factor NusA [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • N utilization substance protein A [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transcription termination [ISSLink to PubMed article]
    Molecular Function: transcription termination factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTELLDALL VLESEKGISK DIIIDAIEAA LISAYKRNFN QAQNVRVSFN PQVGTIQVLA  60
   61 RKDVVDNVFD PRLEISVEEA RQINPNYQDG DVLEIEVTPK DFGRIAAQTA KQVVTQRVRE 120
  121 AERGVIYSEF SDREEDIMVG IVQRQDARFI YVSLGKVEAL LPVSEQMPNE QYKPHDRIRV 180
  181 FITKVEKTTK GPQIYVSRTH PGLLKRLFEM EVPEIYDGTV EIRSVAREAG DRSKISVHAE 240
  241 NIDVDPVGSC VGPKGQRVQR IVDELKGEKI DIVRWSNDPV EYVANALSPS QVVKVLVDEE 300
  301 EKATTVVVPD HQLSLAIGKR GQNARLAAKL TGWKIDIKSE SDAKQLGIVT EEDSVVAFGF 360
  361 DSVEDEIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..368] PSI-BLAST 92.39794 Crystal structure of NusA from Thermotoga maritima: a structure-based role of the N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription termination factor activity
    		•  6.18058830887387 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.56369131794526 bayes_pls_golite062009
  • binding
    		•  1.18862393890403 bayes_pls_golite062009
  • catalytic activity
    		•  0.471337605075652 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.463825470364686 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.21243001318793 bayes_pls_golite062009
  • DNA binding
    		•  0.11293132181233 bayes_pls_golite062009
  • protein binding
    		•  0.0127233627751602 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle