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Protein Overview: gi|30258796, gi|...

General Information:
Name(s) found: gi|30264151 [NCBI NR]
gi|30258796 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30264151|ref|NP_846528.1| anti-sigma F factor [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30258796|gb|AAP28014.1| anti-sigma F factor antagonist [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 146 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: asexual sporulation [ISSLink to PubMed article]
    regulation of transcription, DNA-dependent [ISSLink to PubMed article]
    Molecular Function: sigma factor antagonist activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNEMNLQFS ALSQNESFAR VTVAAFIAQL DPTMEELTEI KTVVSEAVTN AIIHGYEGNA  60
   61 EGVVYISVIL EEAMVKLTIR DEGIGIFNLD EARQPLFTTK PELERSGMGF TIMENFMDEV 120
  121 EVISNESFGT TIHLTKYLSN SNALCN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] PSI-BLAST 24.69897 Crystal Structures of the ADP and ATP bound forms of the Bacillus Anti-sigma factor SpoIIAB in complex with the Anti-anti-sigma SpoIIAA:Poised for phosphorylation complex with ATP, crystal form II

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.4793446884777 bayes_pls_golite062009
  • signal transducer activity
    		•  2.06838336910818 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.06838336910818 bayes_pls_golite062009
  • protein histidine kinase activity
    		•  1.8906654876652 bayes_pls_golite062009
  • phosphotransferase activity, nitrogenous group as acceptor
    		•  1.85910793808345 bayes_pls_golite062009
  • two-component sensor activity
    		•  1.85862055392094 bayes_pls_golite062009
  • protein kinase activity
    		•  1.75594994699944 bayes_pls_golite062009
  • kinase activity
    		•  1.62312315629423 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.62206149398362 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.58219702413095 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.36033057569078 bayes_pls_golite062009
  • transferase activity
    		•  1.29436538270168 bayes_pls_golite062009
  • DNA binding
    		•  1.07338044513491 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.03442329723544 bayes_pls_golite062009
  • binding
    		•  0.162154598845105 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle