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Protein Overview: UPL3_ARATH

General Information:
Name(s) found: UPL3_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1888 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: DNA endoreduplication [IMP]
    trichome branching [IMP]
    Molecular Function: ubiquitin-protein ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METRSRKRAE ATSAAPSSSS SSPPPPPSAS GPTTRSKRAR LSSSSSSSLA PTPPSSSTTT  60
   61 RSRSSRSAAA AAPMDTSTDS SGFRRGGRGN RGNNNDNSDK GKEKEHDVRI RERERERDRA 120
  121 REQLNMDAAA AAARSADEDD DNDSEDGNGG FMHPNMSSAS SALQGLLRKL GAGLDDLLPS 180
  181 SGIGSASSSH LNGRMKKILS GLRAEGEEGK QVEALTQLCE MLSIGTEDSL STFSVDSFVP 240
  241 VLVGLLNHES NPDIMLLAAR ALTHLCDVLP SSCAAVVHYG AVSCLVARLL TIEYMDLAEQ 300
  301 SLQALKKISQ EHPTACLRAG ALMAVLSYLD FFSTGVQRVA LSTAANMCKK LPSDASDYVM 360
  361 EAVPLLTNLL QYHDSKVLEY ASICLTRIAE AFAPYPEKLD ELCNHGLVTQ AASLISTSNS 420
  421 GGGQASLSVS TYTGLIRLLS TCASGSPLGF RTLLLLGISS ILKDILLGSG VSANASVSPA 480
  481 LSRPADQIYE IVNLANELLP PLPEGVISLP TSTNALVKGS CQKKSSPSTS GKQEDILKIS 540
  541 PREKLLGDQP ELLQQFGLDL LPVLVQIYGS SVNGTIRHKC LSVIGKLMYF SSSEMIQSLI 600
  601 GDTNISSFLA GVLAWKDPQV LVPALQVAEI LMEKLPETFS KVFVREGVVH AVDQLVLVGK 660
  661 PSHASPTDKD NDCVPGSARS RRYRRRSSNA NSDGNQSEEP KNPASLTIGA NHNSLDTPTA 720
  721 SFMLRETVSS CAKAFKDKYF PSDGGDVDVG VTDDLLHLKN LCTKLTAGID DHKVKGKGKS 780
  781 KASGPFLGDF SASKEEYLIG VISEILGEIS KGDGVSTFEF IGSGVVAALL NYFSCGYFSK 840
  841 EKISELNLPK LRQEGLRRFK AFLEVALPFD GNEGKVPPMT VLIQKLQNAL SSLERFPVVL 900
  901 SHPSRSLSGS ARLSSGLSAL AHPLKLRLCR ASGEKTLRDY SSNIVLIDPL ASLAAVEEFL 960
  961 WPRVQRSESA LKPAAPIGNT EPGTLPSGAG VSSPSSSTPA STTRRHSSRS RSAINIGDTS1020
 1021 KKDPVHEKGT SSSKGKGKGV MKPAQADKGP QTRSNAQKRA VLDKDTQMKP ASGDSSSEDE1080
 1081 ELEISPVDID DALVIEEDDI SDDEDDDNED VLDDSLPMCT PDKVHDVKLA DSVDDDGLAT1140
 1141 SGRQMNPASG GTSGAAAARA SDSIDTGIGN SYGSRGALSF AAAAMAGLGA ASGRGIRGSR1200
 1201 DLHGRTLNRS SDEPSKLIFT AAGKQLSRHL TIYQAVQRQL MLDEDDDDRF GGSDLVSSDG1260
 1261 SRFNDIYTIM YQRPDSQVNR LSVGGASSTT PSKSTKSATT NSSVESQSHR ASLLDSILQG1320
 1321 ELPCDLEKSN STYNVLALLR VLEGLNQLCP RLRAQTLSDR FAEGKITSLD DLSTTAAKVP1380
 1381 LDEFVNSKLT PKLARQIQDA LALCSGSLPS WCYQLTRACP FLFPFQTRRQ YFYSTAFGLS1440
 1441 RALNRLQQQQ GADGSGSTNE REMRIGRLQR QKVRVSRNRI LDSAAKVMEM YSSQKAVLEV1500
 1501 EYFGEVGTGL GPTLEFYTLL SHDLQKASLG MWRSSSGDKV SMQIGRDEIE DGKPSAANRD1560
 1561 IVLAPLGLFP RPWPSTADIS EGGQFHKVIE YFRLLGRVMA KALQDGRLLD VPLSTAFYKL1620
 1621 ILGQELDLHD IVLFDAELGK TLQELRVVVA RKHYLEGVGG DNSSTISDLC LRGCRIEDLS1680
 1681 LEFTLPGYPE YILRSGDEIV DITNLEEYIS LVVDATVKRG VTRQIEAFRS GFNQVFDITS1740
 1741 LQIFTPSELD YLLCGRRELW EVETLAEHIK FDHGYNAKSP AIINLLEIMG ELTADQQRAF1800
 1801 CQFVTGAPRL PPGGLAVLNP KLTIVRKHSS TSSAAANGAG ASETADDDLP SVMTCANYLK1860
 1861 LPPYSTKEIM YKKLLYAINE GQGSFDLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] PSI-BLAST 96.69897 No description for 2z6gA was found.
    2 View Details [104..204] PSI-BLAST 22.39794 Crystal Structure of The Cand1-Cul1-Roc1 Complex
    3 View Details [205..1016] PSI-BLAST 44.154902 No description for 2qmrA was found.
    4 View Details [1017..1091] deduced N/A No confident structure predictions are available.
    5 View Details [1092..1323] deduced N/A No confident structure predictions are available.
    6 View Details [1324..1424] PSI-BLAST 4.69897 NMR structure of WW domains (WW3-4) from Suppressor of Deltex
    7 View Details [1425..1888] PSI-BLAST 127.0 No description for 2oniA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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