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Protein Overview: gi|12721601, gi|...

General Information:
Name(s) found: gi|15603109 [NCBI NR]
gi|12721601 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|15603109|ref|NP_246181.1| L-ribulose-5-phosphate 4-epimerase [Pasteurella multocida subsp. multocida str. Pm70] [NCBI NR]
  • gi|12721601|gb|AAK03328.1| AraD [Pasteurella multocida subsp. multocida str. Pm70] [NCBI NR]
    • Organism: Pasteurella multocida subsp. multocida str. Pm70
    Length: 243 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRTKNERRW FPMLEELKQK VFEANLALPK YKLVTFTWGN VSGIDREKNL VVIKPSGVEY  60
   61 DTMTVEDMVV VDLFTGQVVE GNKKPSSDTA THLELYRQFP SLGGIVHTHS RHATIWAQAG 120
  121 EDLIAAGTTH ADYFYGSIPC TRKMTPAEIQ GEYELETGKV IVETFRVRGI DPKDVPAVLV 180
  181 HSHGPFAWGT DPDNAVHNAV VLEEIGYMNL FSRQLRPNLA SMQQELLDKH YLRKHGKNAY 240
  241 YGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 72.0 L-ribulose-5-phosphate 4-epimerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • L-ribulose-phosphate 4-epimerase activity
    		•  3.50507333471987 bayes_pls_golite062009
  • catalytic activity
    		•  1.9511172460719 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  1.08084403816388 bayes_pls_golite062009
  • lyase activity
    		•  0.77829514510632 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.42493443904865 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.2178091782272 bayes_pls_golite062009
  • racemase and epimerase activity
    		•  0.15063402811264 bayes_pls_golite062009
  • isomerase activity
    		•  0.0458367676418101 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle