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Protein Overview: PNP_PSEAE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..701] PSI-BLAST 157.0 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ribonuclease activity
  • 3.62650207668685 bayes_pls_golite062009
  • transcription regulator activity
  • 2.64513435028798 bayes_pls_golite062009
  • exoribonuclease activity
  • 2.49584565422948 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 2.48625785660839 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 2.46667410843173 bayes_pls_golite062009
  • RNA binding
  • 1.96263727771326 bayes_pls_golite062009
  • nucleic acid binding
  • 1.06121115244578 bayes_pls_golite062009
  • transcription termination factor activity
  • 1.01993495617192 bayes_pls_golite062009
  • binding
  • 0.953779727473657 bayes_pls_golite062009
  • structural constituent of ribosome
  • 0.82905129800799 bayes_pls_golite062009
  • ATP-dependent peptidase activity
  • 0.66778558090199 bayes_pls_golite062009
  • structural molecule activity
  • 0.61730676636766 bayes_pls_golite062009
  • carbohydrate kinase activity
  • 0.51810239718467 bayes_pls_golite062009
  • DNA binding
  • 0.42372608430605 bayes_pls_golite062009
  • 0.416217645025381 bayes_pls_golite062009
  • hydrolase activity
  • 0.355379071501158 bayes_pls_golite062009
  • catalytic activity
  • 0.10089766806364 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.0287026367466632 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle