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Protein Overview: gi|30256883, gi|...

General Information:
Name(s) found: gi|30262252 [NCBI NR]
gi|30256883 [NCBI NR]
Description(s) found:
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  • gi|30262252|ref|NP_844629.1| penicillin-binding protein 3 [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30256883|gb|AAP26115.1| penicillin-binding protein 3 [Bacillus anthracis str. Ames] [NCBI NR]
  • penicillin-binding protein 3 [Bacillus thuringiensis serovar konkukian str. 97-27]gi|49185095|ref|YP_028347.1| penicillin-binding protein 3 [Bacillus anthracis str. Sterne]gi|47527534|ref|YP_018883.1| penicillin-binding protein 3 [Bacillus anthracis str [nrdb_11152004_Chlamydomonas]
  • penicillin-binding protein 3 [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 661 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: penicillin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIWGILFL CLTFMLVGCG KEEKPQEAFD TYAKAWNKQK FAEMYDQLSE KAKKDISKKE  60
   61 FTEKYEKIYS GIEVKNLKVE AGEVKEDKKD EGPIPFKVSM DTVGGKINFG HEAKMVKEKD 120
  121 GDKESWKVDW TPDFIFPGMT KDSKVRMQTT EPKRGEIYDR NGKGLATNGK ASEIGLIPEK 180
  181 LGDTAPQTKE TVAKLLNMSV EEIDQKLAAK WVKPGYLVPI GILPEGATQN TYIDLPGVST 240
  241 KPVNVRTYPL GEAAAHLTGY IGKVNAEDLK TLQKKGYQAD DPVGKAGLEQ VLEEKLRGKK 300
  301 GGRVFVEDAQ GKEIKNLAKT DAVDGENVTL TIDSAVQEKT YNEMKGEAGS SAAINPKSGE 360
  361 TLALVSSPAY DPNIIARGTS KAQREAWNND PKKPMTNRFT QLSVPGSVFK PITAAIGLET 420
  421 KTIDPKEELK IEGLKWTKDS SWGNYYVTRV KDANPIDFDK AMKYSDNIYF AQEALKIGKD 480
  481 KFMSEAKKFG FDEKLPIEYG FPASKIANDG IKNDIQMADT GYGQGQVLMT PLHLALTYAP 540
  541 IVNDGNIPSP YIIKTDKQPK VWKENVISKG NQDILKTAMT KVINDPDGTG KIAKIDGMTL 600
  601 AGKTGTAELK VSKEAEGKEL GWFAAFDLNS PDMVITMMIE DVKGRGGSNI PAEKVKHVFQ 660
  661 K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..661] PSI-BLAST 93.522879 Penicillin binding protein 2a (PBP2A), N-terminal domain; Penicillin binding protein 2a (PBP2A), middle domain; Penicillin binding protein 2a (PBP2A), C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • drug binding
    		•  3.43867028493374 bayes_pls_golite062009
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.12650314537616 bayes_pls_golite062009
  • penicillin binding
    		•  2.89507018520983 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  2.70174066798582 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.69091897402517 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  1.96547160092829 bayes_pls_golite062009
  • catalytic activity
    		•  1.85492008367309 bayes_pls_golite062009
  • exopeptidase activity
    		•  1.44522375970439 bayes_pls_golite062009
  • binding
    		•  1.11566650386305 bayes_pls_golite062009
  • peptidase activity
    		•  0.376767771035659 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.308828795129834 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.163657050466595 bayes_pls_golite062009
  • protein binding
    		•  0.0666688846338231 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle