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Protein Overview: gi|30263935, gi|...

General Information:
Name(s) found: gi|30263935 [NCBI NR]
gi|30258579 [NCBI NR]
Description(s) found:
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  • gi|30263935|ref|NP_846312.1| prophage LambdaBa02, N-acetylmuramoyl-L-alanine amidase family protein 2 [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30258579|gb|AAP27798.1| prophage LambdaBa02, N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus anthracis str. Ames] [NCBI NR]
  • prophage LambdaBa02, N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus anthracis str. Sterne]gi|47529367|ref|YP_020716.1| prophage LambdaBa02, N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus anthracis str. 'Ames Ancestor']gi|30263935|ref|NP_ [nrdb_11152004_Chlamydomonas]
  • prophage LambdaBa02, N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 234 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell wall macromolecule catabolic process [ISSLink to PubMed article]
    Molecular Function: N-acetylmuramoyl-L-alanine amidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIRKKLVVP SKYGTKCPYT MKPKYITVHN TYNDAPAENE VNYMITNNNE VSFHVAVDDK  60
   61 QAIQGIPWER NAWACGDGNG PGNRESISVE ICYSKSGGDR YYKAENNAVD VVRQLMSMYN 120
  121 IPIENVRTHQ SWSGKYCPHR MLAEGRWGAF IQKVKSGNVA SATVTPKQNI IQTGAFSPYE 180
  181 LPDAVGALKS LNMTGKAIIN PEGLTYIVTD PTSDVQLQAF KEYLERKDWW YDDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 38.69897 Structure of PlyL
    2 View Details [164..234] PSI-BLAST 7.09691 Choline binding domain of autolysin C-LytA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • N-acetylmuramoyl-L-alanine amidase activity
    		•  5.24309205254681 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  3.80195358174059 bayes_pls_golite062009
  • catalytic activity
    		•  0.998996028203371 bayes_pls_golite062009
  • hydrolase activity
    		•  0.83639977289922 bayes_pls_golite062009
  • binding
    		•  0.528043510871228 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.0631264776586918 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle