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Protein Overview: gi|30263450, gi|...

General Information:
Name(s) found: gi|30263450 [NCBI NR]
gi|30258085 [NCBI NR]
Description(s) found:
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  • gi|30263450|ref|NP_845827.1| penicillin-binding protein, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30258085|gb|AAP27313.1| penicillin-binding protein, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • penicillin-binding protein, putative [Bacillus anthracis str. Sterne]gi|47528838|ref|YP_020187.1| penicillin-binding protein, putative [Bacillus anthracis str. 'Ames Ancestor']gi|30263450|ref|NP_845827.1| penicillin-binding protein, putative [Bacillus a [nrdb_11152004_Chlamydomonas]
  • penicillin-binding protein, putative [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 377 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: penicillin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKWLIVFF IFAVFSGSVV ALIHASKGKK YDIKAFSNLN NKQKHDMQEV DANEKKHYEV  60
   61 VAGKLDQYLK DKGFNGSVLV ASKDHVILRK GYGYANMKDK VFTTPRTKYR IGSITKTVVA 120
  121 ISIMQLKEKG KLNIEDNVNK YIPSFPADKN ITLRNLLTHT SGLPDQGKGR VDAASRLKLV 180
  181 TWIGSQALQF PAGTGWKYTD YNYMVLAYIV EKITNKPLAE YVKENIFTPV EMHESGMGAT 240
  241 LPEDIFLAEG YTRKDNELIA APRLKMNWLY GCGEMYTTVE DMKRLDEAIM NGKLLSKQSV 300
  301 LDMFTASPAR KYGFSFYTYP DYYHNHGVLA GWNTFNNFNW DKKTFVILFS NVQNGMNDTF 360
  361 NQEFRKMAND LIEGNGA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..377] PSI-BLAST 76.09691 Citrobacter freundii GN346 Class C beta-Lactamase Complexed with Transition-State Analog of Cefotaxime

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.37745387761459 bayes_pls_golite062009
  • penicillin binding
    		•  3.16077730467133 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  3.02516915958448 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.98959517344587 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  2.34154596924818 bayes_pls_golite062009
  • catalytic activity
    		•  2.2253600206851 bayes_pls_golite062009
  • drug binding
    		•  2.00354593744547 bayes_pls_golite062009
  • exopeptidase activity
    		•  1.66768404710194 bayes_pls_golite062009
  • peptidase activity
    		•  0.0621279448114327 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle