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Protein Overview: gi|30257267, gi|...

General Information:
Name(s) found: gi|30262635 [NCBI NR]
gi|30257267 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30262635|ref|NP_845012.1| penicillin-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30257267|gb|AAP26498.1| penicillin-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 340 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: penicillin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKDQIDNI VKETYRHIDF SGVILVKEKK GIVYEEVFGY ANRNECINNT LQTRFGIASG  60
   61 CKIFTAIGIC QLVENGVITF QTKLKECLSV NFPNFNEDIT IHHLLTHSSG IPDYFDESIM 120
  121 DNFEDLWKQT PMYLLKSLKD FLPLFQNRDM MYAPGSKFHY NNAGFIILGL IIEEQTGLTF 180
  181 TEYIEKNIFN PIGMNHSGYF SLDRLPRQTA LGYIKDEISQ TWRTNAYSIP IKGGSDGGAF 240
  241 ITASDMLKFW EALFNYEIIS QEYTKILLTP HIQVNNNQSY GYGIWIETRE NKIFKYHVMG 300
  301 YDPGVSFRSA VYPDLGITLV IPSNKGAGAE KLMIEIEGSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..340] PSI-BLAST 74.30103 Citrobacter freundii GN346 Class C beta-Lactamase Complexed with Transition-State Analog of Cefotaxime

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.12650314537616 bayes_pls_golite062009
  • penicillin binding
    		•  2.89507018520983 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  2.70174066798582 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.69091897402517 bayes_pls_golite062009
  • drug binding
    		•  2.17649666461595 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  1.96547160092829 bayes_pls_golite062009
  • catalytic activity
    		•  1.85492008367309 bayes_pls_golite062009
  • exopeptidase activity
    		•  1.44522375970439 bayes_pls_golite062009
  • binding
    		•  0.183081253999081 bayes_pls_golite062009
  • peptidase activity
    		•  0.0617672513497823 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle