YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|46399541, gi|...

General Information:
Name(s) found: gi|46445900 [NCBI NR]
gi|46399541 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|46445900|ref|YP_007265.1| putative nitrogen regulatory IIA protein (enzyme IIA-ntr) (phosphotransferase enzyme II, A component) [Candidatus Protochlamydia amoebophila UWE25] [NCBI NR]
  • gi|46399541|emb|CAF22990.1| putative nitrogen regulatory IIA protein (enzyme IIA-ntr) (phosphotransferase enzyme II, A component) [Candidatus Protochlamydia amoebophila UWE25] [NCBI NR]
  • putative nitrogen regulatory IIA protein (enzyme IIA-ntr) (phosphotransferase enzyme II, A component) [Parachlamydia sp. UWE25]gi|46399541|emb|CAF22990.1| putative nitrogen regulatory IIA protein (enzyme IIA-ntr) (phosphotransferase enzyme II, A componen [nrdb_11152004_Chlamydomonas]
  • putative nitrogen regulatory IIA protein (enzyme IIA-ntr) (phosphotransferase enzyme II, A component) [Candidatus Protochlamydia amoebophila UWE25] [nr-271106-contam.fasta]
    • Organism: Candidatus Protochlamydia amoebophila UWE25
    Length: 239 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQDLKIRDV ADLLNVSETT IRRWVSDRKI PSYSINKHHY FSRTEIENWV ISHKFDKNQS  60
   61 SSPFTQSIKT TVAEKKPATG GSKQFSLFRA IHKGDVLYNL SGKTKEEIIR KTMKKTAKNL 120
  121 NVDAEVMTEL LLDRENMMPT ALNNGVAIPH TRDSLHAQHD AIVVVFLDKP LEYGALDGKP 180
  181 VNTLFFLFAA DDKRHLHLLA KIAHLSSQPK ALEFFKTKPS KDKLLAFIKD WESQISQIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] FFAS03 1.77 Terminase gpNU1 subunit domain
    2 View Details [72..239] PSI-BLAST 31.522879 Nitrogen regulatory bacterial protein IIa-ntr

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.15084451351262 bayes_pls_golite062009
  • DNA binding
    		•  1.89121395172205 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.85709490142946 bayes_pls_golite062009
  • transcription factor activity
    		•  1.63947569382682 bayes_pls_golite062009
  • binding
    		•  1.25832675558318 bayes_pls_golite062009
    2
    Term Confidence Notes
  • protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
    		•  4.89047341597444 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  3.92377913213665 bayes_pls_golite062009
  • transporter activity
    		•  2.16741930408232 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.05879816720019 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.87457143976439 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.82451780056478 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.7251575499811 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.789390286938302 bayes_pls_golite062009
  • catalytic activity
    		•  0.547925219495929 bayes_pls_golite062009
  • binding
    		•  0.396676636991646 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.19707628828681 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.12881601139602 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.10209580008722 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle