YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|39996479, gi|...

General Information:
Name(s) found: gi|39996479 [NCBI NR]
gi|39983359 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|39996479|ref|NP_952430.1| 3-hydroxybutyryl-CoA dehydratase [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39983359|gb|AAR34753.1| 3-hydroxybutyryl-CoA dehydratase [Geobacter sulfurreducens PCA] [NCBI NR]
  • 3-hydroxybutyryl-CoA dehydratase [Geobacter sulfurreducens PCA]gi|39983359|gb|AAR34753.1| 3-hydroxybutyryl-CoA dehydratase [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • 3-hydroxybutyryl-CoA dehydratase [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 260 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: butyrate metabolic process [ISSLink to PubMed article]
    fermentation [ISSLink to PubMed article]
    Molecular Function: enoyl-CoA hydratase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGYHLLLEI SEGIAAITIN RPSAMNAMTP ATLDELAEAV RRVNGAPEVR AAILTGAGTK  60
   61 AFMAGADIAA MRDMTPAQAR DLARQAHQIY ADIERSPKTF IAAVNGYALG GGCELAMACD 120
  121 IRLASENAKF GQPEINIGII PGFGGTQRLP RLVGKGRALE MILTGEMIDA REAHRIGLVN 180
  181 RVVTQEELPE EARRLARAIA AKGMVAVGLC KEAVNNGLNM ELTKACAYEA ELFAHSFSTA 240
  241 DQKEGMSAFL EKRPAVFRDC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..260] PSI-BLAST 71.30103 Enoyl-CoA hydratase (crotonase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • long-chain-3-hydroxyacyl-CoA dehydrogenase activity
    		•  5.99914207874933 bayes_pls_golite062009
  • long-chain-enoyl-CoA hydratase activity
    		•  5.38361434383109 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  3.92947460544831 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  3.89913842968597 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  3.85567083340773 bayes_pls_golite062009
  • acetyl-CoA C-acyltransferase activity
    		•  3.6090947563188 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  3.4980371783229 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  2.44182589784656 bayes_pls_golite062009
  • dodecenoyl-CoA delta-isomerase activity
    		•  1.80820904754223 bayes_pls_golite062009
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • propionyl-CoA carboxylase activity
    		•  1.20853698666984 bayes_pls_golite062009
  • ligase activity
    		•  0.98581896521131 bayes_pls_golite062009
  • binding
    		•  0.578223105269736 bayes_pls_golite062009
  • 3-hydroxybutyryl-CoA epimerase activity
    		•  0.241955774397835 bayes_pls_golite062009
  • racemase and epimerase activity, acting on hydroxy acids and derivatives
    		•  0.099208209617217 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, transposing C=C bonds
    		•  0.0918189681606029 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle