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Protein Overview: gi|39995674, gi|...

General Information:
Name(s) found: gi|39995674 [NCBI NR]
gi|39982437 [NCBI NR]
Description(s) found:
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  • gi|39995674|ref|NP_951625.1| DNA-3-methyladenine glycosylase I [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982437|gb|AAR33898.1| DNA-3-methyladenine glycosylase I [Geobacter sulfurreducens PCA] [NCBI NR]
  • DNA-3-methyladenine glycosylase I [Geobacter sulfurreducens PCA]gi|39982437|gb|AAR33898.1| DNA-3-methyladenine glycosylase I [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • DNA-3-methyladenine glycosylase I [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 191 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [ISSLink to PubMed article]
    Molecular Function: DNA-3-methyladenine glycosylase I activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQRCEWCGT DPLYVAYHDG EWGVPAHDDR HLFEMLILEG AQAGLSWLTI LRKREAYRRA  60
   61 FAGFDAETVA AWSEADVARL LADPGIVRNR LKIESTIRNA RGVLKIREEF GSLDAYLWRF 120
  121 VDHAPRHNAW RSLTDIPART EQSDAMSKDL KRRGFNFVGS TICYAFMQAV GMVNDHVVHC 180
  181 FRHDEIRRSG G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] PSI-BLAST 86.39794 3-Methyladenine DNA glycosylase I (Tag)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA N-glycosylase activity
    		•  4.08559331236111 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing N-glycosyl compounds
    		•  3.73234184319832 bayes_pls_golite062009
  • DNA-(apurinic or apyrimidinic site) lyase activity
    		•  3.12421941323765 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  2.54759386266723 bayes_pls_golite062009
  • catalytic activity
    		•  2.50389926428623 bayes_pls_golite062009
  • oxidized base lesion DNA N-glycosylase activity
    		•  1.80199518353554 bayes_pls_golite062009
  • alkylbase DNA N-glycosylase activity
    		•  1.75218522602775 bayes_pls_golite062009
  • hydrolase activity
    		•  1.39000450534744 bayes_pls_golite062009
  • DNA-3-methyladenine glycosylase I activity
    		•  1.14337995879633 bayes_pls_golite062009
  • oxidized purine base lesion DNA N-glycosylase activity
    		•  0.473206156100251 bayes_pls_golite062009
  • uracil DNA N-glycosylase activity
    		•  0.29478804124408 bayes_pls_golite062009
  • oxidized pyrimidine base lesion DNA N-glycosylase activity
    		•  0.253198605718519 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.46

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle