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Protein Overview: gi|39982293, gi|...

General Information:
Name(s) found: gi|39995530 [NCBI NR]
gi|39982293 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|39995530|ref|NP_951481.1| flagellar motor switch protein FliN [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982293|gb|AAR33754.1| flagellar motor switch protein FliN [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 101 amino acids

    Gene Ontology:
    Cellular Component: bacterial-type flagellum basal body [ISSLink to PubMed article]
    Biological Process: ciliary or flagellar motility [ISSLink to PubMed article]
    Molecular Function: motor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDFTKEETK DGELDRKNLE FILDIPLQLT VELGRTKILV KDVLQLNQGA VVELTKLAGE  60
   61 PLDVFVNSKL VARGEAVVVN EKFGVRLVDI VSPNERVEKV L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 20.30103 Crystal structure of the c-terminal fragment of the putative flagelar motor switch protein FliN (TM0680a) from Thermotoga maritima at 1.85 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • motor activity
    		•  3.07201707618408 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.17271522721174 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.12849207458848 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.10878539079436 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.10781034885807 bayes_pls_golite062009
  • binding
    		•  0.851616221377121 bayes_pls_golite062009
  • hydrolase activity
    		•  0.325371951256 bayes_pls_golite062009
  • protein binding
    		•  0.253452523212299 bayes_pls_golite062009
  • catalytic activity
    		•  0.145477743192426 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle