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Protein Overview: gi|29542627, gi|...

General Information:
Name(s) found: gi|29655355 [NCBI NR]
gi|29542627 [NCBI NR]
Description(s) found:
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  • gi|29655355|ref|NP_821047.1| uroporphyrinogen-III synthase [Coxiella burnetii RSA 493] [NCBI NR]
  • gi|29542627|gb|AAO91561.1| uroporphyrinogen-III synthase [Coxiella burnetii RSA 493] [NCBI NR]
  • uroporphyrinogen-III synthase [Coxiella burnetii RSA 493]gi|29542627|gb|AAO91561.1| uroporphyrinogen-III synthase [Coxiella burnetii RSA 493] [nrdb_11152004_Chlamydomonas]
  • uroporphyrinogen-III synthase [Coxiella burnetii RSA 493] [nr-271106-contam.fasta]
    • Organism: Coxiella burnetii RSA 493
    Length: 268 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: porphyrin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: uroporphyrinogen-III synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENESLKNKT IMITRPEWQG ELLKKAIERR GGAVILFPTL IIKPINKCNY SPFASASFPP  60
   61 SRESGSPDDK MTKAGFLNSS DILIFLSANA VKHSPILNFK AEQKLVAIGT GTAAALFQRG 120
  121 LSVDAVPEHF SSEGLLDLPL LHQVTGKTIA IFCGENSRPY LENELIHRGA NVFSIITYRR 180
  181 ERPVVNKKTI DALTHQTLHA IVSTSAESLQ NLCTLFESHQ HWLHRIPLVV ISKRMENLAK 240
  241 SQGFHLVLLA DNPGEKAIIK VLSTKYPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..268] PSI-BLAST 40.0 Uroporphyrinogen III synthase (U3S, HemD)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • uroporphyrinogen-III synthase activity
    		•  3.19339392327514 bayes_pls_golite062009
  • catalytic activity
    		•  1.50868196926865 bayes_pls_golite062009
  • hydro-lyase activity
    		•  0.850411184249311 bayes_pls_golite062009
  • lyase activity
    		•  0.0536528882085157 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle