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Protein Overview: SCPA_COXBU

General Information:
Name(s) found: SCPA_COXBU [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Segregation and condensation protein A OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=scpA PE=3 SV=1 [Swiss-Prot]
    • Organism: Coxiella burnetii RSA 493
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: chromosome condensation [ISSLink to PubMed article]
    chromosome segregation [ISSLink to PubMed article]
    Molecular Function: binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENQEVVNQL AGFEVKVSGQ PLSKLPEDLY IPPDALRVFL EAFEGPLDLL LYLIKKHNID  60
   61 ILDIPIAEIT RQYMQFVDLM REMRIELAAE YLVMAAMLAE IKSRLLLPRP VVEEENEQDP 120
  121 RAELVRRLQE YERYKKAAYD LDQLPRVGRD TFIADAAVPP MNTAKIHPTA ELPELLNALK 180
  181 DVLQRASLYN AHSIAREPLS IRERMSRILS LVDKENFIAF TRLFTVEEGR MGVVVTLIAT 240
  241 LELIRQSVIE LVQAEPFALI HIRAKG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] Pfam 5.79588 No description for PF02616.5 was found. No confident structure predictions are available.
    2 View Details [187..266] FFAS03 1.47 Sc Smc1hd:Scc1-C complex, ATPgS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.88909660213693 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.659146952966611 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.526614151800537 bayes_pls_golite062009
  • DNA binding
    		•  0.443743931209129 bayes_pls_golite062009
  • protein binding
    		•  0.215355480170793 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.0198908199689938 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle