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Protein Overview: gi|24351091, gi|...

General Information:
Name(s) found: gi|24376072 [NCBI NR]
gi|24351091 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24376072|ref|NP_720115.1| ribonuclease T2 family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24351091|gb|AAN57559.1|AE015891_10 ribonuclease, T2 family [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA catabolic process [ISSLink to PubMed article]
    Molecular Function: endoribonuclease activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTALFSLPIR KRDSQPVTLC RHLQGVLGLL LIGLTPITTV AAPATGEFIA NKRCELFQSK  60
   61 NKQTNPDDWQ SNIGERYPVA ELLGNSANPD WLRVRTNAIT SPLRWIKGDC GQYHASVAAE 120
  121 TYQPSSSGKP VQTTTASDIN AINSESLKEH GTSEKRQGNL CQIEDNYDSH VLALSWQSTF 180
  181 CELYGSRKAE CRALRQTTDA PQWQHFSLHG LWPNRQQCGT RYGFCSSVKQ QPSDFCDYPE 240
  241 VPLNASVQKN LEEVMPSARY GTCLERHEWW KHGTCRDQDP NDYFLLATQL TQEVNASVWV 300
  301 KEFIHQRIGK KVTQKELNQS FDTSFGQGAH TKVTLDCAKG LLNEIRINLP QEIKLSDSIP 360
  361 SLLAKAPKAK KTNCPDPLLI DMPN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] deduced N/A No confident structure predictions are available.
    2 View Details [160..384] PSI-BLAST 55.39794 Crystal Structure of the Nicotiana glutinosa Ribonuclease NW

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ribonuclease activity
    		•  3.44118209547515 bayes_pls_golite062009
  • endoribonuclease activity
    		•  2.304469131639 bayes_pls_golite062009
  • hydrolase activity
    		•  1.22739012618202 bayes_pls_golite062009
  • catalytic activity
    		•  0.991305974398186 bayes_pls_golite062009
  • endonuclease activity
    		•  0.880107148932689 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.81513220820228 bayes_pls_golite062009
  • nuclease activity
    		•  0.282205454426451 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle